RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ATP8B3O60423 1300 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 A0A0B4J269 797 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 LACTBL1A8MY62 500 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 E2F7Q96AV8 911 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 ASS1P00966 412 aaKnown RBP19.31■□□□□ 0.68
USP48-204ENST00000400301 GNAT1P11488 350 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 ZBTB41Q5SVQ8 909 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 DCLK2Q8N568 766 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 AGR3Q8TD06 166 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 CYP4F11Q9HBI6 524 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 XPNPEP1Q9NQW7 623 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 KLK14Q9P0G3 267 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 KPNA7A9QM74 516 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 MICAL2O94851 1124 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 SLC20A2Q08357 652 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 LRRC38Q5VT99 294 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 GRHL1Q9NZI5 618 aa19.31■□□□□ 0.68
USP48-204ENST00000400301 SMIM24O75264 130 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 TPI1P60174 286 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 PDK2Q15119 407 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 COQ4Q9Y3A0 265 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 EDIL3O43854 480 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 ATICP31939 592 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 CPA2P48052 419 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 PEX5P50542 639 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 CHI3L2Q15782 390 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 RPAINQ86UA6 219 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 RAB3IL1Q8TBN0 382 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 BARX2Q9UMQ3 279 aaPredicted RBP19.3■□□□□ 0.68
USP48-204ENST00000400301 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 CD4P01730 458 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 C4BPAP04003 597 aaKnown RBP19.3■□□□□ 0.68
USP48-204ENST00000400301 BORCS6Q96GS4 357 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 FAM96AQ9H5X1 160 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 IPO11Q9UI26 975 aaKnown RBP19.3■□□□□ 0.68
USP48-204ENST00000400301 PPP2R3BQ9Y5P8 575 aa19.3■□□□□ 0.68
USP48-204ENST00000400301 MAFO75444 373 aaPredicted RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 MTA2O94776 668 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ATP6V1G2O95670 118 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 KDELR1P24390 212 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 DEUP1Q05D60 604 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 SUGP1Q8IWZ8 645 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 CEP120Q8N960 986 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 TCP10LQ8TDR4 215 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ASCC2Q9H1I8 757 aaPredicted RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 E2F8A0AVK6 867 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 PYGBP11216 843 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 NOTUMQ6P988 496 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 STAMBPL1Q96FJ0 436 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 MROH8Q9H579 483 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 XAB2Q9HCS7 855 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 CCDC78A2IDD5 438 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 B2RBV5 119 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 PIAS1O75925 651 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 PAEPP09466 180 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 MMP8P22894 467 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ACADSBP45954 432 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 VGLL4Q14135 290 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ITPRIPL1Q6GPH6 555 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 MTDHQ86UE4 582 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 PLEKHO2Q8TD55 490 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 PIK3R5Q8WYR1 880 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 COPS5Q92905 334 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 CCDC124Q96CT7 223 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 CCDC68Q9H2F9 335 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 PPME1Q9Y570 386 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 SIGLEC16A6NMB1 481 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ZDHHC24Q6UX98 284 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 SLC26A11Q86WA9 606 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ALLCQ8N6M5 410 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 CCNYL1Q8N7R7 359 aa19.29■□□□□ 0.68
USP48-204ENST00000400301 ACO2Q99798 780 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 NTPCRQ9BSD7 190 aaKnown RBP19.29■□□□□ 0.68
USP48-204ENST00000400301 ONECUT3O60422 494 aaPredicted RBP19.28■□□□□ 0.68
USP48-204ENST00000400301 MCF2P10911 925 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 CDC42EP1Q00587 391 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 FSCBQ5H9T9 825 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 EFHC1Q5JVL4 640 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 NSL1Q96IY1 281 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 DRG1Q9Y295 367 aaKnown RBP19.28■□□□□ 0.68
USP48-204ENST00000400301 TMEM191CA6NGB0 347 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 GJB1P08034 283 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 ZNF286BP0CG31 522 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 KPNA2P52292 529 aaKnown RBP19.28■□□□□ 0.68
USP48-204ENST00000400301 ART3Q13508 389 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 GRAMD1BQ3KR37 738 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 SCN4BQ8IWT1 228 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 TLCD1Q96CP7 247 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 ASB7Q9H672 318 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 ZDHHC18Q9NUE0 388 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 RPTORQ8N122 1335 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 ANKRD36CQ5JPF3 1778 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 KBTBD13C9JR72 458 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 H3BRB1 525 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 APOC4-APOC2K7ER74 178 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms