RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CFAP99D6REC4 459 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TPH1P17752 444 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 CCDC3Q9BQI4 270 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 FICDQ9BVA6 458 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TBX20Q9UMR3 447 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 PSMD3O43242 534 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 ARP10275 920 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 RAG1P15918 1043 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 SLC15A2Q16348 729 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 GLIS2Q9BZE0 524 aaPredicted RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 PDGFDQ9GZP0 370 aaPredicted RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 TRPC4Q9UBN4 977 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 ERI2A8K979 691 aaKnown RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 MAGEB2O15479 319 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 APOA1P02647 267 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 RBP3P10745 1247 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TMEM132BQ14DG7 1078 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 TTC39CQ8N584 583 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 EMC1Q8N766 993 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
VAPA-202ENST00000400000 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 RHBGQ9H310 441 aa14.26□□□□□ -0.13
VAPA-202ENST00000400000 C2orf81A6NN90 581 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 ZNF682O95780 498 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 DSG3P32926 999 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 CYP2C19P33261 490 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 S100A5P33763 92 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 CLK1P49759 484 aaKnown RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 TMEM8AQ9HCN3 771 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 LTFP02788 710 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 CYP2C8P10632 490 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 TRIP10Q15642 601 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 ROGDIQ9GZN7 287 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 KRT84Q9NSB2 600 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 RPS6KB2Q9UBS0 482 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 TMEM120BA0PK00 339 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 NUDT14O95848 222 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 HSMCR30P0CW71 290 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 DNAJC3Q13217 504 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 ISLR2Q6UXK2 745 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 TRMT11Q7Z4G4 463 aaKnown RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 TMEM150BA6NC51 233 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 EVPLLA8MZ36 301 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 SLC16A3O15427 465 aaKnown RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 NFICP08651 508 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 SCNN1BP51168 640 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 HALP42357 657 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 CSNK2BP67870 215 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 TMEM154Q6P9G4 183 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 RASGRP2Q7LDG7 609 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 IPCEF1Q8WWN9 437 aaPredicted RBP14.25□□□□□ -0.13
VAPA-202ENST00000400000 MANSC1Q9H8J5 431 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 POLLQ9UGP5 575 aa14.25□□□□□ -0.13
VAPA-202ENST00000400000 NR5A2O00482 541 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 SLC25A27O95847 323 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 MAGEA9P43362 315 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 TERF2Q15554 542 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 VPS72Q15906 364 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 TRIM65Q6PJ69 517 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 MTERF3Q96E29 417 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CHD1O14646 1710 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 PDHXO00330 501 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 EFHC1Q5JVL4 640 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CBWD2Q8IUF1 395 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 RGL4Q8IZJ4 473 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 MRPS31Q92665 395 aaKnown RBP14.24□□□□□ -0.13
VAPA-202ENST00000400000 CLIP3Q96DZ5 547 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 ACOX2Q99424 681 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 DET1Q7L5Y6 550 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 HEATR4Q86WZ0 1026 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 JAMLQ86YT9 394 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 GPRASP2Q96D09 838 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 GOLGA8TH3BQL2 631 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 GPR182O15218 404 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 KCTD19Q17RG1 926 aaPredicted RBP14.24□□□□□ -0.13
VAPA-202ENST00000400000 C16orf89Q6UX73 402 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 C3orf67Q6ZVT6 689 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CAMKK1Q8N5S9 505 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 TRAPPC12Q8WVT3 735 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 RPS6KL1Q9Y6S9 549 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 SHROOM2Q13796 1616 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 TRIM49D1C9J1S8 452 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 ATP6V1C1P21283 382 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 MDH1P40925 334 aaKnown RBP14.24□□□□□ -0.13
VAPA-202ENST00000400000 C11orf63Q6NUN7 778 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 CES3Q6UWW8 571 aa14.24□□□□□ -0.13
VAPA-202ENST00000400000 TPGS1Q6ZTW0 290 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms