RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 MCOLN3Q8TDD5 553 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 MAGED4Q96JG8 741 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 MTMR12Q9C0I1 747 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 CCDC22O60826 627 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 TRIM16O95361 564 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 AMD1P17707 334 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP6V1C1P21283 382 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 ERVK-24P63145 666 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 ABHD16BQ9H3Z7 469 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 AASDHPPTQ9NRN7 309 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 CEP152O94986 1710 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 NCF1BA6NI72 391 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 TMEM88BA6NKF7 163 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 NCF1CA8MVU1 366 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 RASSF9O75901 435 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 F9P00740 461 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 NCF1P14598 390 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 DSG3P32926 999 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 KCNK10P57789 538 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 CENPCQ03188 943 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 MED8Q96G25 268 aa12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 PPIEQ9UNP9 301 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-213ENST00000399629 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 GOLGA8RI6L899 631 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CYP7B1O75881 506 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 RALGDSQ12967 914 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 MTA1Q13330 715 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 RGMBQ6NW40 437 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 EMBQ6PCB8 327 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 TRAV19A0A0A6YYK7 116 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 VDRP11473 427 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 IL1R1P14778 569 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CARSP49589 748 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CACHD1Q5VU97 1274 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ZFYVE1Q9HBF4 777 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 PCMTD2Q9NV79 361 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 PADI4Q9UM07 663 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ATP5HO75947 161 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CCL23P55773 120 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CUL2Q13617 745 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 METTL7BQ6UX53 244 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ALG13Q9NP73 1137 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 NFICP08651 508 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 AP2B1P63010 937 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 PPATQ06203 517 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 CUL4AQ13619 759 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 SLC44A2Q8IWA5 706 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 FEZF2Q8TBJ5 459 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 TMA16Q96EY4 203 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 KLF15Q9UIH9 416 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 TRIM66O15016 1216 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 NUDT14O95848 222 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 BEX3Q00994 111 aa12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 MRPL1Q9BYD6 325 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-213ENST00000399629 MAPK1P28482 360 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 FDFT1P37268 417 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 UBE3AQ05086 875 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 CNPY4Q8N129 248 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 ARMC7Q9H6L4 198 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 TIMM13Q9Y5L4 95 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 IGSF6O95976 241 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 RPN2P04844 631 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 TAF2Q6P1X5 1199 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 ARMC2Q8NEN0 867 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 SKP1P63208 163 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 LAMTOR4Q0VGL1 99 aa12.5□□□□□ -0.41
CACNA1C-213ENST00000399629 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms