RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 ATP1A1P05023 1023 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 RGS4P49798 205 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 RFT1Q96AA3 541 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 MANSC1Q9H8J5 431 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 NARFQ9UHQ1 456 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 ZNF185O15231 689 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 PHGDHO43175 533 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 WEE2P0C1S8 567 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 RALAP11233 206 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 ABCD1P33897 745 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 OTUD3Q5T2D3 398 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 ANAPC2Q9UJX6 822 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 BTBD3Q9Y2F9 522 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 PRKAB1Q9Y478 270 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 MMP1P03956 469 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 ERCC2P18074 760 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 SERPINB8P50452 374 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 EXOSC10Q01780 885 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
CACNA1C-209ENST00000399603 CYBBP04839 570 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 MAGEA2P43356 314 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 LRRC63Q05C16 580 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 PPIDQ08752 370 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 MROH9Q5TGP6 573 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CLVS1Q8IUQ0 354 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 TEX13BQ9BXU2 312 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 HECW2Q9P2P5 1572 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 COL15A1P39059 1388 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 HEATR9A2RTY3 570 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CASP1P29466 404 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CDK8P49336 464 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 C4orf46Q504U0 113 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 FAM9CQ8IZT9 166 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 FAM136AQ96C01 138 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SIPA1Q96FS4 1042 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SLC39A10Q9ULF5 831 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 IFNAR1P17181 557 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 PAICSP22234 425 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 TAF2Q6P1X5 1199 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 LRRC1Q9BTT6 524 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 LOC100506127A0A0U1RQW1 187 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 EFCAB10A6NFE3 127 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 NUDT14O95848 222 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 NUMBP49757 651 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 BST2Q10589 180 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SAMD3Q8N6K7 520 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CATSPER2Q96P56 530 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SEPHS2Q99611 448 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 UBA2Q9UBT2 640 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 KHDRBS3O75525 346 aaKnown RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 AGTP01019 485 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 BMP3P12645 472 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 GJA1P17302 382 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 PTSQ03393 145 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CACHD1Q5VU97 1274 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 RIN2Q8WYP3 895 aaPredicted RBP12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 CAB39LQ9H9S4 337 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 IL1RAPL1Q9NZN1 696 aa12.93□□□□□ -0.34
CACNA1C-209ENST00000399603 SLC16A4O15374 487 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 NMT2O60551 498 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 OR7A10O76100 309 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 DRAP1Q14919 205 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 GPATCH4Q5T3I0 446 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 IPMKQ8NFU5 416 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 GPR63Q9BZJ6 419 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 ELOVL6Q9H5J4 265 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 ZNF432O94892 652 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 STK4Q13043 487 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 ATPAF2Q8N5M1 289 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 PTPRHQ9HD43 1115 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 MCUBQ9NWR8 336 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 H3BN98 237 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 TBX3O15119 743 aa12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-209ENST00000399603 PLOD3O60568 738 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms