RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NPR3P17342 541 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CCR2P41597 374 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 STAT1P42224 750 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 USP46P62068 366 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PDE4CQ08493 712 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TBX2Q13207 712 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 IRF2BP2Q7Z5L9 587 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GRASPQ7Z6J2 395 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 UBA3Q8TBC4 463 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MRFAP1L1Q96HT8 127 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SPATA17Q96L03 361 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SYT11Q9BT88 431 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 IL21Q9HBE4 155 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CAPN11Q9UMQ6 739 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 COG5Q9UP83 839 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 M0QYV0 167 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TRIM66O15016 1216 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 THAP12O43422 761 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TADA3O75528 432 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TPM3P06753 285 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CHRNB2P17787 502 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GRIK1P39086 918 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 EPHB3P54753 998 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 EPHA5P54756 1037 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PTK2Q05397 1052 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ITIH3Q06033 890 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SMAD4Q13485 552 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PRSS36Q5K4E3 855 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TMEM150AQ86TG1 271 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MYO6Q9UM54 1294 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 XYLBO75191 536 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RHOP08100 348 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MMEP08473 750 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CASP14P31944 242 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GPD2P43304 727 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC5A3P53794 718 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 BCAT1P54687 386 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ZBED6P86452 979 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 FMO1Q01740 532 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PLD1Q13393 1074 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 STILQ15468 1287 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MEA1Q16626 185 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TMC6Q7Z403 805 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PIGZQ86VD9 579 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CPLX3Q8WVH0 158 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MYRFLQ96LU7 910 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CEP295NLQ96MC4 621 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PNPLA8Q9NP80 782 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 IL37Q9NZH6 218 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 AIPL1Q9NZN9 384 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ASB3Q9Y575 518 aa13.12□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 FAM92AA1XBS5 289 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 F11P03951 625 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CSH1P0DML2 217 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms