RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 EXOC8Q8IYI6 725 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 KIAA0319LQ8IZA0 1049 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 CYTH2Q99418 400 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.21
PRAME-201ENST00000398741 DHRS4Q9BTZ2 278 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
PRAME-201ENST00000398741 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 ABLIM1O14639 778 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 MT-ND3P03897 115 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 ERBB2P04626 1255 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 FGFR1P11362 822 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 YBX3P16989 372 aaKnown RBP eCLIP13.71□□□□□ -0.22
PRAME-201ENST00000398741 MIPP30301 263 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 CRYMQ14894 314 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 TAZQ16635 292 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 WDR78Q5VTH9 848 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 LONP2Q86WA8 852 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 SPATA18Q8TC71 538 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 ZNF398Q8TD17 642 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 KLRG1Q96E93 195 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 NLRP4Q96MN2 994 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 WDR83Q9BRX9 315 aaKnown RBP13.71□□□□□ -0.22
PRAME-201ENST00000398741 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.22
PRAME-201ENST00000398741 RPF1Q9H9Y2 349 aaKnown RBP13.71□□□□□ -0.22
PRAME-201ENST00000398741 CYLDQ9NQC7 956 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 USP18Q9UMW8 372 aa13.71□□□□□ -0.22
PRAME-201ENST00000398741 NOP56O00567 594 aaKnown RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 LPXNO60711 386 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 CBX6O95503 412 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 NEFHP12036 1026 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 CDH8P55286 799 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 ROR1Q01973 937 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 DPYSL3Q14195 570 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 SPDYAQ5MJ70 313 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 BANPQ8N9N5 519 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 VPS11Q9H270 941 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 MANSC1Q9H8J5 431 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 ASNSD1Q9NWL6 643 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 DCTN4Q9UJW0 460 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 M0QYV0 167 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 PEX10O60683 326 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 TRUB2O95900 331 aaKnown RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 TGFB3P10600 412 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 RAD23BP54727 409 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 YWHAGP61981 247 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRAME-201ENST00000398741 PTPN11Q06124 597 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 PTK7Q13308 1070 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 FAM102AQ5T9C2 384 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 MTDHQ86UE4 582 aaKnown RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 NCAPG2Q86XI2 1143 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 CEP120Q8N960 986 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
PRAME-201ENST00000398741 MZB1Q8WU39 189 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 TBC1D10AQ9BXI6 508 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 SLC17A7Q9P2U7 560 aa13.7□□□□□ -0.22
PRAME-201ENST00000398741 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ACKR2O00590 384 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 B4GALT5O43286 388 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
PRAME-201ENST00000398741 MICAL2O94851 1124 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 IL18RAPO95256 599 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 INHBAP08476 426 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 T-ENOLP0DO92 83 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 CXCL8P10145 99 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 PROZP22891 400 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 EDNRBP24530 442 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 EPHB2P29323 1055 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ELK3P41970 407 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 OVGP1Q12889 678 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 PRKG1Q13976 671 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ACAP1Q15027 740 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 TAF5Q15542 800 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ANKRD20A2Q5SQ80 823 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ANKRD20A1Q5TYW2 823 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
PRAME-201ENST00000398741 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 FAM13CQ8NE31 585 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.69□□□□□ -0.22
PRAME-201ENST00000398741 SLC7A6OSQ96CW6 309 aaPredicted RBP13.69□□□□□ -0.22
PRAME-201ENST00000398741 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 BCO2Q9BYV7 579 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
PRAME-201ENST00000398741 BATF3Q9NR55 127 aa13.69□□□□□ -0.22
PRAME-201ENST00000398741 A0A0G2JND7 137 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 PTPN4P29074 926 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms