RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MTO1Q9Y2Z2 717 aaKnown RBP14.8□□□□□ -0.04
PCDHGA11-201ENST00000398587 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF410Q86VK4 478 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 GANCQ8TET4 914 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 TBCBQ99426 244 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 TASP1Q9H6P5 420 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 PCDH9Q9HC56 1237 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 ADA2Q9NZK5 511 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 NRXN3Q9Y4C0 1643 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 NDST1P52848 882 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 VCPP55072 806 aaKnown RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 FBXO36Q8NEA4 188 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 E2F7Q96AV8 911 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 CDCA5Q96FF9 252 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 GPATCH2LQ9NWQ4 482 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 SNTG2Q9NY99 539 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 TSPAN16Q9UKR8 245 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 H3BQF6 201 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 CAND2O75155 1236 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 UPP2O95045 317 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 EIF4BP23588 611 aaKnown RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 ACTN3Q08043 901 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 MROH9Q5TGP6 573 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 FAM131BQ86XD5 332 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 PCSK9Q8NBP7 692 aaKnown RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 MYCBPAPQ8TBZ2 947 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 HDAC7Q8WUI4 952 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 KAT5Q92993 513 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 PIDD1Q9HB75 910 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 HACD3Q9P035 362 aa14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 MARCOQ9UEW3 520 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.79□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZSCAN5CA6NGD5 496 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PYGBP11216 843 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PEX19P40855 299 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PCSK7Q16549 785 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ICE2Q659A1 982 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 N4BP2L2Q92802 583 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 COLEC11Q9BWP8 271 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 DCLK3Q9C098 648 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 MANSC1Q9H8J5 431 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 DLG4P78352 724 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 KDSRQ06136 332 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PPIL2Q13356 520 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 C10orf120Q5SQS8 335 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 TAF2Q6P1X5 1199 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 USP50Q70EL3 339 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 DSEQ9UL01 958 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 SHOC2Q9UQ13 582 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 RPS6KL1Q9Y6S9 549 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PRRG1O14668 218 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 NDUFS3O75489 264 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 LYPLA2O95372 231 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 YY1P25490 414 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 PBX1P40424 430 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ALDH18A1P54886 795 aaKnown RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 DNAJC3Q13217 504 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 HIC1Q14526 733 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 CCDC138Q96M89 665 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 FZD1Q9UP38 647 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLC30A1Q9Y6M5 507 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ABCC6O95255 1503 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 TLR2O60603 784 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 TFRCP02786 760 aaKnown RBP14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 RARAP10276 462 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 MYL2P10916 166 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 GLRA2P23416 452 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 CUL3Q13618 768 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 DDIASQ8IXT1 998 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 LRRC34Q8IZ02 419 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ELMO2Q96JJ3 720 aa14.78□□□□□ -0.04
PCDHGA11-201ENST00000398587 ZNF263O14978 683 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 ATP9AO75110 1047 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 PDAP1Q13442 181 aaKnown RBP14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 DNAL1Q4LDG9 190 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 TTC23LQ6PF05 361 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 EFHBQ8N7U6 833 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 SLC24A2Q9UI40 661 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 VAV3Q9UKW4 847 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 SDR42E2A6NKP2 422 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 LACTBL1A8MY62 500 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 ENO1P06733 434 aaKnown RBP14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 ADRB2P07550 413 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 AXLP30530 894 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 RTP1P59025 263 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 IQSEC1Q6DN90 963 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 ST13P4Q8IZP2 240 aaPredicted RBP14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 EIF1ADQ8N9N8 165 aaKnown RBP14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 TRPC7Q9HCX4 862 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 MRGBPQ9NV56 204 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 WDR70Q9NW82 654 aa14.77□□□□□ -0.04
PCDHGA11-201ENST00000398587 HOXC6P09630 235 aa14.77□□□□□ -0.05
PCDHGA11-201ENST00000398587 RAD23BP54727 409 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms