RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PKDCCQ504Y2 493 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 MDH1BQ5I0G3 518 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 TMEM240Q5SV17 173 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 LRRC31Q6UY01 552 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 PHLDB2Q86SQ0 1253 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 TTC30AQ86WT1 665 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 SYCE1Q8N0S2 351 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 LRRC57Q8N9N7 239 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 TPCN2Q8NHX9 752 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 RUFY1Q96T51 708 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 CRTAC1Q9NQ79 661 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 AVENQ9NQS1 362 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 ZMYND8Q9ULU4 1186 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 COG5Q9UP83 839 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 FTCDO95954 541 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 TKTP29401 623 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 CCDC142Q17RM4 750 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 PTPN20Q4JDL3 420 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 SLFN11Q7Z7L1 901 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 ANKRD52Q8NB46 1076 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 HNRNPABQ99729 332 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 NUP85Q9BW27 656 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 GPR62Q9BZJ7 368 aa20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 RC3H2Q9HBD1 1191 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-204ENST00000397760 MYBPHLA2RUH7 354 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 SYN3O14994 580 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 HEXIM1O94992 359 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 PDCLQ13371 301 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 BTG3Q14201 252 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 SPOUT1Q5T280 376 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 PSRC1Q6PGN9 363 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 CMTR2Q8IYT2 770 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 ABHD8Q96I13 439 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 GDAP1L1Q96MZ0 367 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■■■□ 19.3
PDLIM2-204ENST00000397760 EHD2Q9NZN4 543 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 UVRAGQ9P2Y5 699 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 SF3B1O75533 1304 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 ALPK3Q96L96 1907 aa20.36■□□□□ 0.85
PDLIM2-204ENST00000397760 HADHBP55084 474 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 FAM171A1Q5VUB5 890 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 LLGL2Q6P1M3 1020 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 FUT10Q6P4F1 479 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 TMEM173Q86WV6 379 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 FUKQ8N0W3 1084 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 DPF3Q92784 378 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 CPXM1Q96SM3 734 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 YME1L1Q96TA2 773 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 MED10Q9BTT4 135 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 SMARCAL1Q9NZC9 954 aa20.35■□□□□ 0.85
PDLIM2-204ENST00000397760 CCDC188H7C350 402 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CLDN5O00501 218 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 OAZ2O95190 189 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 GLI1P08151 1106 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 SETSIPP0DME0 302 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 BCAT1P54687 386 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PDE4CQ08493 712 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 BST2Q10589 180 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 ELAVL2Q12926 359 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 INTS6LQ5JSJ4 861 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CYP4A22Q5TCH4 519 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PAQR9Q6ZVX9 377 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 SRLQ86TD4 932 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CEP57Q86XR8 500 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 OR10T2Q8NGX3 314 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 MYCBPAPQ8TBZ2 947 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 ZNF564Q8TBZ8 553 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 BCL7CQ8WUZ0 217 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 SLC35F5Q8WV83 523 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 RIN2Q8WYP3 895 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 B3GNT5Q9BYG0 378 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 SYNCQ9H7C4 482 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CXXC1Q9P0U4 656 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 FNDC1Q4ZHG4 1894 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 MTA2O94776 668 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CDR1P51861 262 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 SKOR1P84550 965 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 TSPY1Q01534 308 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PLCB3Q01970 1234 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 CUL1Q13616 776 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 EMC10Q5UCC4 262 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PLEKHA7Q6IQ23 1121 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PMF1Q6P1K2 205 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 IQCKQ8N0W5 287 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 C18orf8Q96DM3 657 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 PCED1BQ96HM7 432 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 TMEM209Q96SK2 561 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 EPB41L5Q9HCM4 733 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 TJP2Q9UDY2 1190 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 STRIP2Q9ULQ0 834 aa20.34■□□□□ 0.85
PDLIM2-204ENST00000397760 BUB1BO60566 1050 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 ERBB2P04626 1255 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 RGS7P49802 495 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 SLC20A2Q08357 652 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 MAMLD1Q13495 774 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 VARS2Q5ST30 1063 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 FAM171BQ6P995 826 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 KCNT2Q6UVM3 1135 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms