RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PTPN20Q4JDL3 420 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 CHRDL2Q6WN34 429 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 MMS22LQ6ZRQ5 1243 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 RFFLQ8WZ73 363 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 PACSIN1Q9BY11 444 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 PRO3102Q9H379 93 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 MRPL47Q9HD33 250 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 ALG13Q9NP73 1137 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 MTUS1Q9ULD2 1270 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 NCANO14594 1321 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 WDR27A2RRH5 827 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 ARHGEF15O94989 841 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 CXCL14O95715 111 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 C1RP00736 705 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 RPL34P49207 117 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 TUFMP49411 452 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 RPL10AP62906 217 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 GPM6BQ13491 265 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 ZNF268Q14587 947 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 RSPO2Q6UXX9 243 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 TMEM110Q86TL2 294 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 PIGZQ86VD9 579 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 ZNF461Q8TAF7 563 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 C8orf48Q96LL4 319 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 CPXM1Q96SM3 734 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 SMOQ99835 787 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 THAP2Q9H0W7 228 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 LRRC4Q9HBW1 653 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 TRMT1Q9NXH9 659 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 UVRAGQ9P2Y5 699 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 CNOT8Q9UFF9 292 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 CYTH4Q9UIA0 394 aa24.86■■□□□ 1.57
TSPAN4-202ENST00000397396 PLXNA4Q9HCM2 1894 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 FSCN2O14926 492 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 ABLIM3O94929 683 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 CYP1A2P05177 515 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 RPL17P18621 184 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 GRIK1P39086 918 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 TCEAL1Q15170 157 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 PMF1Q6P1K2 205 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 RNF19BQ6ZMZ0 732 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 RNF10Q8N5U6 811 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 TIFAQ96CG3 184 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 PGLYRP2Q96PD5 576 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 PARVAQ9NVD7 372 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 LCMT1Q9UIC8 334 aa24.85■■□□□ 1.57
TSPAN4-202ENST00000397396 TEX28O15482 410 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 SART1O43290 800 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 FBXO21O94952 628 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 ATF2P15336 505 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 SCNN1AP37088 669 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 PTP4A2Q12974 167 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 REXO1L1PQ8IX06 675 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 SIX6OS1Q8N1H7 587 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 MRPL43Q8N983 215 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 C3orf20Q8ND61 904 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 LZTFL1Q9NQ48 299 aa24.84■■□□□ 1.57
TSPAN4-202ENST00000397396 PTPRDP23468 1912 aa24.83■■□□□ 1.57
TSPAN4-202ENST00000397396 E5RJQ4 531 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 HAPLN1P10915 354 aaPredicted RBP24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 CYP2F1P24903 491 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 ELF1P32519 619 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 RGS7P49802 495 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 ADCY1Q08828 1119 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 PLPP4Q5VZY2 271 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 DNAJC24Q6P3W2 148 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 ATAD1Q8NBU5 361 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 MICAL1Q8TDZ2 1067 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 AUTS2Q8WXX7 1259 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 LACRTQ9GZZ8 138 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 CTTNBP2NLQ9P2B4 639 aa24.83■■□□□ 1.56
TSPAN4-202ENST00000397396 RCCD1A6NED2 376 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ESPNB1AK53 854 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 F8VP50 259 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 GRM6O15303 877 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ADAM12O43184 909 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 BEST1O76090 585 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ERBB2P04626 1255 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 CNPP09543 421 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 RRM1P23921 792 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ARHGAP25P42331 645 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ERVFC1P60507 584 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 MGAT5BQ3V5L5 792 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 RAB41Q5JT25 222 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 PLEKHA7Q6IQ23 1121 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 SCN4BQ8IWT1 228 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 ZMIZ2Q8NF64 920 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 SPATA17Q96L03 361 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 KLHL5Q96PQ7 755 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 SEPT5Q99719 369 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 CNGB3Q9NQW8 809 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 EHD2Q9NZN4 543 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 MYO1AQ9UBC5 1043 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 GUCA1BQ9UMX6 200 aa24.82■■□□□ 1.56
TSPAN4-202ENST00000397396 C2orf71A6NGG8 1288 aa24.81■■□□□ 1.56
TSPAN4-202ENST00000397396 TULP2O00295 520 aa24.81■■□□□ 1.56
TSPAN4-202ENST00000397396 KIF5CO60282 957 aa24.81■■□□□ 1.56
TSPAN4-202ENST00000397396 HADHBP55084 474 aaKnown RBP24.81■■□□□ 1.56
TSPAN4-202ENST00000397396 PLD1Q13393 1074 aa24.81■■□□□ 1.56
TSPAN4-202ENST00000397396 XYLT1Q86Y38 959 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms