RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NXPE3Q969Y0 559 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
SEC13-209ENST00000397117 SDCBP2Q9H190 292 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 PDCL3Q9H2J4 239 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 ACP6Q9NPH0 428 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 NOCTQ9UK39 431 aaKnown RBP14.05□□□□□ -0.16
SEC13-209ENST00000397117 CEP250Q9BV73 2442 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 A0A087X0T9 212 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 GOLGA6L9A6NEM1 432 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CYB561D2O14569 222 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 THAP12O43422 761 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CILPO75339 1184 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 C1RP00736 705 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 URODP06132 367 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 ADH1AP07327 375 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 FAM228BP0C875 321 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
SEC13-209ENST00000397117 CDR2Q01850 454 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DSC1Q08554 894 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 INCA1Q0VD86 236 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 C10orf76Q5T2E6 689 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 TOP6BLQ8N6T0 577 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 PAAF1Q9BRP4 392 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 KCND1Q9NSA2 647 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DPP7Q9UHL4 492 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 PCDHA13Q9Y5I0 950 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CLUHO75153 1309 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 STK25O00506 426 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.165e-9■■■□□ 15.5
SEC13-209ENST00000397117 TACC1O75410 805 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 RFPL2O75678 378 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 GLUD1P00367 558 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
SEC13-209ENST00000397117 PAEPP09466 180 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 SRFP11831 508 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CD19P15391 556 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 MAGEA1P43355 309 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 OR1G1P47890 313 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 GLUD2P49448 558 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 NDST1P52848 882 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DSG1Q02413 1049 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CCDC122Q5T0U0 273 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 ALKBH5Q6P6C2 394 aaKnown RBP14.04□□□□□ -0.16
SEC13-209ENST00000397117 ADGRF2Q8IZF7 708 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 PPP1R13BQ96KQ4 1090 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 SENP8Q96LD8 212 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 MRPL45Q9BRJ2 306 aaKnown RBP14.04□□□□□ -0.16
SEC13-209ENST00000397117 SYT11Q9BT88 431 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 NT5C1AQ9BXI3 368 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 CHST7Q9NS84 486 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 PRG3Q9Y2Y8 225 aaPredicted RBP14.04□□□□□ -0.16
SEC13-209ENST00000397117 SCN1AP35498 2009 aa14.04□□□□□ -0.16
SEC13-209ENST00000397117 ARHGEF37A1IGU5 675 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 USP27XA6NNY8 438 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 ZNF263O14978 683 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 CALCAP01258 141 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 MMEP08473 750 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 GNL1P36915 607 aaPredicted RBP14.03□□□□□ -0.16
SEC13-209ENST00000397117 RAD23BP54727 409 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 UNC93AQ86WB7 457 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 PDCL2Q8N4E4 241 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 C3orf58Q8NDZ4 430 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 SLC30A5Q8TAD4 765 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 LNX1Q8TBB1 728 aaPredicted RBP14.03□□□□□ -0.16
SEC13-209ENST00000397117 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
SEC13-209ENST00000397117 HEXIM2Q96MH2 286 aaKnown RBP14.03□□□□□ -0.16
SEC13-209ENST00000397117 TBC1D17Q9HA65 648 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 NAGPAQ9UK23 515 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 CA14Q9ULX7 337 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 L1RE1Q9UN81 338 aa14.03□□□□□ -0.16
SEC13-209ENST00000397117 REXO2Q9Y3B8 237 aaKnown RBP14.03□□□□□ -0.16
SEC13-209ENST00000397117 A8MXQ7 604 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 ANHXE9PGG2 379 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 F8W810 466 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 MED7O43513 233 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 FAM163BP0C2L3 166 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 ODC1P11926 461 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 LAMP2P13473 410 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 CHRNB2P17787 502 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 VAV2P52735 878 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 FMO1Q01740 532 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 ORC1Q13415 861 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 ARHGAP29Q52LW3 1261 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 LILRA6Q6PI73 481 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 GPR65Q8IYL9 337 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 TMEM86AQ8N2M4 240 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 SLC4A11Q8NBS3 891 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 GPR152Q8TDT2 470 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 WHAMMQ8TF30 809 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 HASPINQ8TF76 798 aa14.02□□□□□ -0.16
SEC13-209ENST00000397117 DDX1Q92499 740 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms