RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FSIP1Q8NA03 581 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 C8orf76Q96K31 380 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 PNKPQ96T60 521 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 ACBD6Q9BR61 282 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
SCFD1-202ENST00000396629 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCFD1-202ENST00000396629 FREM2Q5SZK8 3169 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 NPHP3-ACAD11A0A0J9YXS1 232 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 LAD1O00515 517 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 ARHGAP33O14559 1287 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 ADAM23O75077 832 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 TNFRSF4P43489 277 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 SLC6A11P48066 632 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 PDE6CP51160 858 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 MESP2Q0VG99 397 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 KCNB1Q14721 858 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 INTS6LQ5JSJ4 861 aaKnown RBP9.06□□□□□ -0.96
SCFD1-202ENST00000396629 EMC10Q5UCC4 262 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 SLC36A4Q6YBV0 504 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 ADGRG2Q8IZP9 1017 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 PDCL2Q8N4E4 241 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 FBXO18Q8NFZ0 1043 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 SPATA18Q8TC71 538 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 HMGB4Q8WW32 186 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 CACNA2D2Q9NY47 1150 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-202ENST00000396629 PCDHB6Q9Y5E3 794 aa9.06□□□□□ -0.96
SCFD1-202ENST00000396629 LEFTY2O00292 366 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 SH3BP5O60239 455 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 KAT7O95251 611 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ZIC2O95409 532 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-202ENST00000396629 APODP05090 189 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 SYPP08247 313 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 FTH1P19P0C7X4 201 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 PLA2G4BP0C869 781 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 DHCR24Q15392 516 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 CFAP221Q4G0U5 840 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 DTHD1Q6ZMT9 781 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 OR2I1PQ8NGU4 316 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ZNF560Q96MR9 790 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 CAMK1GQ96NX5 476 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ODF2LQ9ULJ1 636 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 L1RE1Q9UN81 338 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 LAMA5O15230 3695 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 SHROOM3Q8TF72 1996 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 TCRBV21S2A2A0A5A6 115 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ANKRD63C9JTQ0 380 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 PNPLA4P41247 253 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 GRIA2P42262 883 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 MAGEA11P43364 429 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ACOT2P49753 483 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ZNF131P52739 623 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 SLC7A9P82251 487 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 RPL6Q02878 288 aaKnown RBP9.05□□□□□ -0.96
SCFD1-202ENST00000396629 ZNF33AQ06730 810 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 FILIP1Q7Z7B0 1213 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 GLRX5Q86SX6 157 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 C12orf40Q86WS4 652 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 NT5DC4Q86YG4 428 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 PHTF2Q8N3S3 785 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 GLIS3Q8NEA6 775 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
SCFD1-202ENST00000396629 FUBP3Q96I24 572 aaKnown RBP eCLIP9.05□□□□□ -0.96
SCFD1-202ENST00000396629 SPATA17Q96L03 361 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 DDX43Q9NXZ2 648 aaKnown RBP9.05□□□□□ -0.96
SCFD1-202ENST00000396629 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 PCDHB9Q9Y5E1 797 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 STYXL1Q9Y6J8 313 aa9.05□□□□□ -0.96
SCFD1-202ENST00000396629 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 A0A1W2PQD8 194 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 K7ENM7 598 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SLC9A3R1O14745 358 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ATP2C1P98194 919 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 GTF2BQ00403 316 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 MYL7Q01449 175 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 RESTQ13127 1097 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TMEM119Q4V9L6 283 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 RHBDF2Q6PJF5 856 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 OSTM1Q86WC4 334 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SPATA2LQ8IUW3 424 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SLC41A1Q8IVJ1 513 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TMEM86AQ8N2M4 240 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 DEFB119Q8N690 84 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 PNPLA1Q8N8W4 532 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 MDM1Q8TC05 714 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 CEP295NLQ96MC4 621 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 FIZ1Q96SL8 496 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 KIAA1522Q9P206 1035 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 IGHV1OR15-9A0A0B4J2B8 117 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 EIF4E1BA6NMX2 242 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 GABRDO14764 452 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 HUS1O60921 280 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms