RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 LRRC71Q8N4P6 559 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 FBF1Q8TES7 1133 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 DHRS4Q9BTZ2 278 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 FZD8Q9H461 694 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 BATF3Q9NR55 127 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 POLIQ9UNA4 740 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 USH1CQ9Y6N9 552 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 PCNTO95613 3336 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 EDF1O60869 148 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 MARK3P27448 753 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 SLC1A5Q15758 541 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 KCNT1Q5JUK3 1230 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 PLPPR4Q7Z2D5 763 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 XYLT1Q86Y38 959 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 ANKMY2Q8IV38 441 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 LRRC8CQ8TDW0 803 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 PYROXD1Q8WU10 500 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 ZBTB10Q96DT7 871 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 GPR20Q99678 358 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 NXF1Q9UBU9 619 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 A0A1W2PPM1 405 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 GOLGA8MH3BSY2 632 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 BANF1O75531 89 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 AP1G2O75843 785 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 RPL22P35268 128 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 RAD23BP54727 409 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 FNBP1LQ5T0N5 605 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 AP1ARQ63HQ0 302 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 ADGRD1Q6QNK2 874 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 FAM43BQ6ZT52 329 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 KIF2BQ8N4N8 673 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 RSAD2Q8WXG1 361 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 SPATC1LQ9H0A9 340 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 ACSS3Q9H6R3 686 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 TXLNGQ9NUQ3 528 aa16.74■□□□□ 0.27
CCHCR1-202ENST00000396263 SMNDC1O75940 238 aaKnown RBP eCLIP16.73■□□□□ 0.277e-7■■□□□ 14.2
CCHCR1-202ENST00000396263 ATP5HO75947 161 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ZWINTO95229 277 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 IL18RAPO95256 599 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ARIH2O95376 493 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 MSH2P43246 934 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 PSMC4P43686 418 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 RAP1GAPP47736 663 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 GAD2Q05329 585 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 TFDP1Q14186 410 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ACAP1Q15027 740 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 KLHL38Q2WGJ6 581 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 MSS51Q4VC12 460 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 CAPRIN2Q6IMN6 1127 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 CMASQ8NFW8 434 aaPredicted RBP16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 WDR83Q9BRX9 315 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 SLCO1B3Q9NPD5 702 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 METTL5Q9NRN9 209 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 SIX4Q9UIU6 781 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 APOC4-APOC2K7ER74 178 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 APOC2P02655 101 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 TSHRP16473 764 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 NCAPG2Q86XI2 1143 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 TRIM50Q86XT4 487 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 AGAP11Q8TF27 550 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 MYLK2Q9H1R3 596 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 KCNH4Q9UQ05 1017 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 CHKBQ9Y259 395 aa16.73■□□□□ 0.27
CCHCR1-202ENST00000396263 ERBB2P04626 1255 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 CD48P09326 243 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 KRT4P19013 534 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 SSTR1P30872 391 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 GJA5P36382 358 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 GABRB2P47870 512 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 PPIL2Q13356 520 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 HHATQ5VTY9 493 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 EEPD1Q7L9B9 569 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 SLC4A11Q8NBS3 891 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 MZB1Q8WU39 189 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 MCRS1Q96EZ8 462 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 SDCBP2Q9H190 292 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 CDT1Q9H211 546 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 C10orf88Q9H8K7 445 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 ETAA1Q9NY74 926 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 TNFSF13BQ9Y275 285 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 DCTN3O75935 186 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 OSTNP61366 133 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 CELF3Q5SZQ8 465 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 LVRNQ6Q4G3 990 aa16.72■□□□□ 0.27
CCHCR1-202ENST00000396263 C3orf62Q6ZUJ4 267 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms