RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 NT5DC4Q86YG4 428 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 LMO3Q8TAP4 145 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 TSSK1BQ9BXA7 367 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 VPS11Q9H270 941 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 GPATCH2LQ9NWQ4 482 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.84□□□□□ -1.31
BDNF-203ENST00000395978 SSX2IPQ9Y2D8 614 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 PEX14O75381 377 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 ZNF189O75820 626 aaPredicted RBP6.84□□□□□ -1.31
BDNF-203ENST00000395978 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 BAG2O95816 211 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 LGALS2P05162 132 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 GSTA1P08263 222 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 TYK2P29597 1187 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 PTGIRP43119 386 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 SERPINB9P50453 376 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 COG7P83436 770 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 PTP4A2Q12974 167 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 PPIL2Q13356 520 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 AMHR2Q16671 573 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 FAXCQ5TGI0 409 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 NXNQ6DKJ4 435 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 MON1BQ7L1V2 547 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 PLEKHH3Q7Z736 793 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 CEP120Q8N960 986 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 ATXN2LQ8WWM7 1075 aaKnown RBP6.84□□□□□ -1.31
BDNF-203ENST00000395978 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 TBCBQ99426 244 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 XAB2Q9HCS7 855 aaKnown RBP6.84□□□□□ -1.31
BDNF-203ENST00000395978 NPHS2Q9NP85 383 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.84□□□□□ -1.31
BDNF-203ENST00000395978 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 INPP5FQ9Y2H2 1132 aa6.84□□□□□ -1.31
BDNF-203ENST00000395978 TRIM49D1C9J1S8 452 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 B4GALT5O43286 388 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 B4GALT4O60513 344 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 USP2O75604 605 aaPredicted RBP6.84□□□□□ -1.32
BDNF-203ENST00000395978 CYP1A1P04798 512 aaPredicted RBP6.84□□□□□ -1.32
BDNF-203ENST00000395978 NFICP08651 508 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 UNGP13051 313 aaPredicted RBP6.84□□□□□ -1.32
BDNF-203ENST00000395978 MX2P20592 715 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 KDELR1P24390 212 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 ADORA2AP29274 412 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 CHKAP35790 457 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 DEUP1Q05D60 604 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 ASPHQ12797 758 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.32
BDNF-203ENST00000395978 PDK1Q15118 436 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 GRIK4Q16099 956 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 ITPRIPL1Q6GPH6 555 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 CYB5D1Q6P9G0 228 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 THEM5Q8N1Q8 247 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 PGBD4Q96DM1 585 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 CDCA5Q96FF9 252 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 PAFAH2Q99487 392 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 GPR20Q99678 358 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 KATNAL1Q9BW62 490 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 SETD4Q9NVD3 440 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 ZFATQ9P243 1243 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 BCAP29Q9UHQ4 241 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 PHTF1Q9UMS5 762 aa6.84□□□□□ -1.32
BDNF-203ENST00000395978 R3HDM2Q9Y2K5 976 aaKnown RBP6.84□□□□□ -1.32
BDNF-203ENST00000395978 ADGRA3Q8IWK6 1321 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 C10orf71Q711Q0 1435 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 LY75O60449 1722 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 APOC4-APOC2K7ER74 178 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 O00370 1275 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 TNPO2O14787 897 aaKnown RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 LUC7L3O95232 432 aaKnown RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 APOC2P02655 101 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 GJB1P08034 283 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 GHRP10912 638 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 MMP13P45452 471 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 BCAT1P54687 386 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 MAP3K21Q5TCX8 1036 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 DCAF12L1Q5VU92 463 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 B3GNT9Q6UX72 402 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 ABI1Q8IZP0 508 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 AGGF1Q8N302 714 aaeCLIP6.83□□□□□ -1.32
BDNF-203ENST00000395978 C12orf50Q8NA57 414 aaPredicted RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
BDNF-203ENST00000395978 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 DDX27Q96GQ7 796 aaKnown RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 EPAS1Q99814 870 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 VCXQ9H320 206 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 SMYD3Q9H7B4 428 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 APOBEC3GQ9HC16 384 aaKnown RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 BTBD7Q9P203 1132 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 APOBEC2Q9Y235 224 aaKnown RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 COL2A1P02458 1487 aaPredicted RBP6.83□□□□□ -1.32
BDNF-203ENST00000395978 UMODL1Q5DID0 1318 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 ZNF541Q9H0D2 1346 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 hCG_1818297A0A087WSY0 165 aa6.83□□□□□ -1.32
BDNF-203ENST00000395978 SOWAHBA6NEL2 793 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms