RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HLTFQ14527 1009 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS41-203ENST00000395969 CNGA2Q16280 664 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 KRT71Q3SY84 523 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 MTERF2Q49AM1 385 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 DCAF17Q5H9S7 520 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 EFHC2Q5JST6 749 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 EFCAB12Q6NXP0 572 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 LCLAT1Q6UWP7 414 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 SEPT14Q6ZU15 432 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 CROCCP2Q86T23 111 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 ZNF276Q8N554 614 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 EXD1Q8NHP7 514 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 UBLCP1Q8WVY7 318 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 RTP4Q96DX8 246 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 SYT15Q9BQS2 421 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 IRF2BPLQ9H1B7 796 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 EPB41L4BQ9H329 900 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
VPS41-203ENST00000395969 ZFYVE28Q9HCC9 887 aa5.64□□□□□ -1.51
VPS41-203ENST00000395969 DDX39AO00148 427 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 O00370 1275 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PODXLO00592 558 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GABRDO14764 452 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ADCY6O43306 1168 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GALR2O43603 387 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 GJB6O95452 261 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ACADSP16219 412 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TNFAIP3P21580 790 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CHRNA3P32297 505 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZNF135P52742 658 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 AIF1P55008 147 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ATP11AP98196 1134 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CAV1Q03135 178 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 RPS6KA1Q15418 735 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 WDR44Q5JSH3 913 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 WDR78Q5VTH9 848 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 DUPD1Q68J44 220 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SLC27A1Q6PCB7 646 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ILDR2Q71H61 639 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GET4Q7L5D6 327 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 DDX42Q86XP3 938 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS41-203ENST00000395969 FBXO16Q8IX29 292 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 GPR65Q8IYL9 337 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ANKRD13CQ8N6S4 541 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TOP6BLQ8N6T0 577 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZSWIM2Q8NEG5 633 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CTNNBL1Q8WYA6 563 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 KCTD13Q8WZ19 329 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 FATE1Q969F0 183 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NT5C3BQ969T7 300 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 DTNBP1Q96EV8 351 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TRAPPC9Q96Q05 1148 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ELAC2Q9BQ52 826 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 SLC4A5Q9BY07 1137 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 OXCT2Q9BYC2 517 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 RETREG1Q9H6L5 497 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PPCSQ9HAB8 311 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PNPLA8Q9NP80 782 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GGT7Q9UJ14 662 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 AMFRQ9UKV5 643 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 KAT6AQ92794 2004 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TMEM150BA6NC51 233 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 C3orf70A6NLC5 250 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 SIGLEC16A6NMB1 481 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 C9IYK1 514 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ZSCAN9O15535 394 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 SGPL1O95470 568 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 FTCDO95954 541 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CD4P01730 458 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 VDRP11473 427 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 AKR1A1P14550 325 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 GCLMP48507 274 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NOP14P78316 857 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 FAM189BP81408 668 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 MXRA7P84157 204 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CUL3Q13618 768 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 NCOA4Q13772 614 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PIGHQ14442 188 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 SLC10A6Q3KNW5 377 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 OR52E8Q6IFG1 317 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 RHBDF2Q6PJF5 856 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 HOOK3Q86VS8 718 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 KSR1Q8IVT5 923 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 KLHL7Q8IXQ5 586 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 CRIPAKQ8N1N5 446 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 METTL13Q8N6R0 699 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 ENDOVQ8N8Q3 282 aaKnown RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 FAM136AQ96C01 138 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 KLHL29Q96CT2 875 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PGAP3Q96FM1 320 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 KIF12Q96FN5 646 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 FAM213AQ9BRX8 229 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 PACSIN1Q9BY11 444 aa5.63□□□□□ -1.51
VPS41-203ENST00000395969 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
VPS41-203ENST00000395969 NSRP1Q9H0G5 558 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms