RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ARHGEF26Q96DR7 871 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 CEP295NLQ96MC4 621 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 UBE2OQ9C0C9 1292 aaKnown RBP14.42□□□□□ -0.1
VAPB-202ENST00000395802 OSGEPQ9NPF4 335 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 HSFX1Q9UBD0 423 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 CYTH4Q9UIA0 394 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 MAFFQ9ULX9 164 aa14.42□□□□□ -0.1
VAPB-202ENST00000395802 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 E5RJQ4 531 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 CLDN5O00501 218 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 TBC1D4O60343 1298 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 PALMO75781 387 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 BDNFP23560 247 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 GRIK1P39086 918 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 SLC1A1P43005 524 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 MAGEA11P43364 429 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 MAP3K7CLP57077 242 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 UBE3AQ05086 875 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 C11orf63Q6NUN7 778 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 PIGZQ86VD9 579 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 LRRTM3Q86VH5 581 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 XYLT1Q86Y38 959 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 VPS52Q8N1B4 723 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.41□□□□□ -0.1
VAPB-202ENST00000395802 FEZF2Q8TBJ5 459 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 NAPGQ99747 312 aaPredicted RBP14.41□□□□□ -0.1
VAPB-202ENST00000395802 LPIN3Q9BQK8 851 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 IP6K2Q9UHH9 426 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 SALL4Q9UJQ4 1053 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 ANAPC7Q9UJX3 599 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 CAPN6Q9Y6Q1 641 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 ERBB2P04626 1255 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 GTF2F1P35269 517 aaKnown RBP eCLIP14.41□□□□□ -0.1
VAPB-202ENST00000395802 TUBB2AQ13885 445 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 EFHC1Q5JVL4 640 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 TPGS2Q68CL5 300 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 OR6B2Q6IFH4 312 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 ARCQ7LC44 396 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 FNIP1Q8TF40 1166 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 MCRS1Q96EZ8 462 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 TUBB2BQ9BVA1 445 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 TRIM62Q9BVG3 475 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 CNGB3Q9NQW8 809 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 ABI2Q9NYB9 513 aaPredicted RBP14.41□□□□□ -0.1
VAPB-202ENST00000395802 PCDHA11Q9Y5I1 949 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 CDY1Q9Y6F8 540 aa14.41□□□□□ -0.1
VAPB-202ENST00000395802 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
VAPB-202ENST00000395802 CTSAP10619 480 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 CTNNB1P35222 781 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 TUFMP49411 452 aaKnown RBP14.4□□□□□ -0.1
VAPB-202ENST00000395802 RGS7P49802 495 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 SLC6A3Q01959 620 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 SHHQ15465 462 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 FAM102AQ5T9C2 384 aaPredicted RBP14.4□□□□□ -0.1
VAPB-202ENST00000395802 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 TAS1R1Q7RTX1 841 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 PEX26Q7Z412 305 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 KLHL23Q8NBE8 558 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 B3GALT6Q96L58 329 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 TMEM209Q96SK2 561 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 NCAPGQ9BPX3 1015 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 C11orf84Q9BUA3 381 aaPredicted RBP14.4□□□□□ -0.1
VAPB-202ENST00000395802 EHD2Q9NZN4 543 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 FNIP2Q9P278 1114 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 AMFRQ9UKV5 643 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 COG5Q9UP83 839 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 PTPRSQ13332 1948 aa14.4□□□□□ -0.1
VAPB-202ENST00000395802 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 GRID2IPA4D2P6 1211 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 C5orf67F2Z3F1 127 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 LPXNO60711 386 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 URI1O94763 535 aaPredicted RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 GLI1P08151 1106 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 ARPP19P56211 112 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 RPL10AP62906 217 aaKnown RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 PIGHQ14442 188 aaPredicted RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 ACAP1Q15027 740 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 C2CD6Q53TS8 623 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 SLFN11Q7Z7L1 901 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 LRRC57Q8N9N7 239 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 ZNF461Q8TAF7 563 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 C8orf48Q96LL4 319 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 SMOQ99835 787 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 VN1R3Q9BXE9 311 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 TMLHEQ9NVH6 421 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 AFF4Q9UHB7 1163 aaKnown RBP14.39□□□□□ -0.11
VAPB-202ENST00000395802 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
VAPB-202ENST00000395802 UQCRHLA0A096LP55 91 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TCRBV5S1A1TA0A578 114 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 TMEM191CA6NGB0 347 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 MIF4GDA9UHW6 222 aaKnown RBP14.38□□□□□ -0.11
VAPB-202ENST00000395802 GOLGA8SH3BPF8 625 aa14.38□□□□□ -0.11
VAPB-202ENST00000395802 C2CD2LO14523 706 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms