RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 THNSL1Q8IYQ7 743 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 LILRB1Q8NHL6 650 aaPredicted RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 MGARPQ8TDB4 240 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SLC20A1Q8WUM9 679 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 KAT5Q92993 513 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SNX27Q96L92 541 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 MOGAT1Q96PD6 335 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 PCDHB18PQ96TA0 734 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 CELF4Q9BZC1 486 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 THAP2Q9H0W7 228 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SLITRK6Q9H5Y7 841 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 ARFGAP3Q9NP61 516 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 UBN1Q9NPG3 1134 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.51□□□□□ -1.37
AFP-202ENST00000395792 CTTNBP2NLQ9P2B4 639 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 TMEM59LQ9UK28 342 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 DOCK3Q8IZD9 2030 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 A0A0B4J203 849 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 LINC00854A0A1B0GVQ3 168 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SYNDIG1LA6NDD5 238 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 C2orf81A6NN90 581 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 PGRMC1O00264 195 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 MUSKO15146 869 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 B4GALT5O43286 388 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 HMGCRP04035 888 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 WEE2P0C1S8 567 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 HARSP12081 509 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 GBP1P32455 592 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 RAD52P43351 418 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 ASPAP45381 313 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 WNT7BP56706 349 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 MYL6P60660 151 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 MRPS35P82673 323 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 MRPS6P82932 125 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 SARNPP82979 210 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 ACAP1Q15027 740 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 PRAMEF19Q5SWL8 479 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 NXNQ6DKJ4 435 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 TMEM270Q6UE05 265 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 FIP1L1Q6UN15 594 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 TAB3Q8N5C8 712 aaPredicted RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 ZNF564Q8TBZ8 553 aaPredicted RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 CHAC2Q8WUX2 184 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 ZNF653Q96CK0 615 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 ZNF560Q96MR9 790 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SMAD5Q99717 465 aaKnown RBP6.51□□□□□ -1.37
AFP-202ENST00000395792 SLC39A3Q9BRY0 314 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SARGQ9BW04 601 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 PARD6BQ9BYG5 372 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 FAM129AQ9BZQ8 928 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 CISHQ9NSE2 258 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 PARVAQ9NVD7 372 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 DPP3Q9NY33 737 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 OBP2AQ9NY56 170 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SEPT3Q9UH03 358 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SRRDQ9UH36 339 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 TFR2Q9UP52 801 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
AFP-202ENST00000395792 TTLL3Q9Y4R7 772 aa6.51□□□□□ -1.37
AFP-202ENST00000395792 TTLL13PA6NNM8 815 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 VSTM5A8MXK1 200 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 RASA4BC9J798 803 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 GPR182O15218 404 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 TLR3O15455 904 aaKnown RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 RASA4O43374 803 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 THAP12O43422 761 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 BUB1BO60566 1050 aaPredicted RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 ADAMTS4O75173 837 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 MTRF1O75570 445 aaKnown RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 PGRP06401 933 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 PNMA6AP0CW24 399 aaPredicted RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 CXCL8P10145 99 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 KRT10P13645 584 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 CAPN2P17655 700 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 HOXA11P31270 313 aaPredicted RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 CETN2P41208 172 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 FLT3LGP49771 235 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 NOMO3P69849 1222 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 NSUN2Q08J23 767 aaKnown RBP eCLIP6.5□□□□□ -1.37
AFP-202ENST00000395792 NNTQ13423 1086 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 PIN1Q13526 163 aaPredicted RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 SNX17Q15036 470 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 CNGA2Q16280 664 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 C21orf62-AS1Q17RA5 79 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 MAP3K21Q5TCX8 1036 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 FAAH2Q6GMR7 532 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 JADE1Q6IE81 842 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 PLEKHA7Q6IQ23 1121 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 MON1BQ7L1V2 547 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 OTOP3Q7RTS5 596 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 RNF180Q86T96 592 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 C1orf127Q8N9H9 656 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 CCDC26Q8TAB7 109 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.5□□□□□ -1.37
AFP-202ENST00000395792 ANKRD49Q8WVL7 239 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 ZNF606Q8WXB4 792 aa6.5□□□□□ -1.37
AFP-202ENST00000395792 ZNF75CPQ92670 426 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms