RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ATOH1Q92858 354 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 SMARCD1Q96GM5 515 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 HNRNPABQ99729 332 aaKnown RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 NT5C1AQ9BXI3 368 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 SLC46A2Q9BY10 475 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CSNK1G1Q9HCP0 422 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 IL37Q9NZH6 218 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 ZNF292O60281 2723 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 KRBA1A5PL33 1030 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 TNFRSF10BO14763 440 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 CFHP08603 1231 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 NPR3P17342 541 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 ANXA13P27216 316 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 MON1AQ86VX9 555 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 IRF2BP1Q8IU81 584 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 CMTM8Q8IZV2 173 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 RSPRY1Q96DX4 576 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 IRF2BPLQ9H1B7 796 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 SLITRK6Q9H5Y7 841 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 TRPV5Q9NQA5 729 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 COMMD8Q9NX08 183 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 EHD2Q9NZN4 543 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 DACH1Q9UI36 760 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 MAGED2Q9UNF1 606 aaPredicted RBP14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 DMDP11532 3685 aa14.18□□□□□ -0.14
HLA-DMA-202ENST00000395303 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 FANCMQ8IYD8 2048 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 FAM92AA1XBS5 289 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 HEPACAM2A8MVW5 462 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 AFPP02771 609 aaKnown RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 CCDC130P13994 396 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 PFKLP17858 780 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 PSMC3P17980 439 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 TRIM21P19474 475 aaKnown RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 TBXAS1P24557 533 aaPredicted RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 VIPR2P41587 438 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 PPP3CCP48454 512 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 CLCN5P51795 746 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 USP46P62068 366 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 PFKPQ01813 784 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 FCHO2Q0JRZ9 810 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 KCNH2Q12809 1159 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 ZNF268Q14587 947 aaPredicted RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 C12orf29Q8N999 325 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 SLC4A11Q8NBS3 891 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 MRPS31Q92665 395 aaKnown RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 DNASE1L2Q92874 299 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 SMOQ99835 787 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 ARID3AQ99856 593 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 THAP9Q9H5L6 903 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 DMAP1Q9NPF5 467 aaPredicted RBP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 CISHQ9NSE2 258 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 FBXL21Q9UKT6 434 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
HLA-DMA-202ENST00000395303 ARNTLO00327 626 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 PRAMEF12O95522 483 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 MBD3O95983 291 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 TCF3P15923 654 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CD58P19256 250 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 NBL1P41271 181 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 RAD23BP54727 409 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 STARD6P59095 220 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 YWHAEP62258 255 aaKnown RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CETN1Q12798 172 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 ORC1Q13415 861 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CUL2Q13617 745 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 ASTLQ6HA08 431 aaPredicted RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 SIX5Q8N196 739 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 NUP93Q8N1F7 819 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 MAB21L3Q8N8X9 362 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 SLC2A14Q8TDB8 520 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 OVCA2Q8WZ82 227 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 CNOT6LQ96LI5 555 aaKnown RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 NT5C1BQ96P26 610 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 LRRC3BQ96PB8 259 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 KCNK16Q96T55 309 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 MED10Q9BTT4 135 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 TRMT61BQ9BVS5 477 aaKnown RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 ARHGEF3Q9NR81 526 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 KRT82Q9NSB4 513 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 GCNT4Q9P109 453 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 PTPRZ1P23471 2315 aaPredicted RBP14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 ATG2BQ96BY7 2078 aa14.16□□□□□ -0.14
HLA-DMA-202ENST00000395303 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
HLA-DMA-202ENST00000395303 CHADO15335 359 aa14.15□□□□□ -0.14
HLA-DMA-202ENST00000395303 AP1G2O75843 785 aa14.15□□□□□ -0.14
HLA-DMA-202ENST00000395303 BEST1O76090 585 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms