RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 ADAMTS1Q9UHI8 967 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 NOCTQ9UK39 431 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 NENFQ9UMX5 172 aa12.16□□□□□ -0.46
RTN1-203ENST00000395090 R3HCC1Q9Y3T6 440 aaKnown RBP12.16□□□□□ -0.46
RTN1-203ENST00000395090 OFD1O75665 1012 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 CLTBP09497 229 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 P4HA1P13674 534 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 CYP11B1P15538 503 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 CYP2C18P33260 490 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 PNPLA4P41247 253 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
RTN1-203ENST00000395090 SPA17Q15506 151 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 SLC47A2Q86VL8 602 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 DDX1Q92499 740 aaKnown RBP12.15□□□□□ -0.46
RTN1-203ENST00000395090 VWCEQ96DN2 955 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 DEF6Q9H4E7 631 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 CISHQ9NSE2 258 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 GDAP2Q9NXN4 497 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
RTN1-203ENST00000395090 PDCD11Q14690 1871 aaKnown RBP12.15□□□□□ -0.46
RTN1-203ENST00000395090 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 DDX3XO00571 662 aaKnown RBP eCLIP12.15□□□□□ -0.47
RTN1-203ENST00000395090 PPEF2O14830 753 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 KIAA0355O15063 1070 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 IPO7O95373 1038 aaKnown RBP12.15□□□□□ -0.47
RTN1-203ENST00000395090 WEE2P0C1S8 567 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 CHRNB2P17787 502 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.47
RTN1-203ENST00000395090 RFC2P35250 354 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 USP8P40818 1118 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.47
RTN1-203ENST00000395090 CYP27A1Q02318 531 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 NOP9Q86U38 636 aaKnown RBP12.15□□□□□ -0.47
RTN1-203ENST00000395090 VPS36Q86VN1 386 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 TTC39CQ8N584 583 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 CRELD1Q96HD1 420 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 SCLYQ96I15 445 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 AGPAT1Q99943 283 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 SDCBP2Q9H190 292 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 RASSF4Q9H2L5 321 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 TMEM161AQ9NX61 479 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 NAGPAQ9UK23 515 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 PCDHB4Q9Y5E5 795 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.47
RTN1-203ENST00000395090 TIMP1P01033 207 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 FAM163BP0C2L3 166 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 KRT5P13647 590 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 CCL23P55773 120 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 LILRA4P59901 499 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 ATP11AP98196 1134 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 CDR2Q01850 454 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 INCA1Q0VD86 236 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 TMEM270Q6UE05 265 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 ZNF677Q86XU0 584 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 RPS6KC1Q96S38 1066 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 TCF12Q99081 682 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 ACP6Q9NPH0 428 aa12.14□□□□□ -0.47
RTN1-203ENST00000395090 A0A0U1RQJ8 604 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 PJA2O43164 708 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 GZMAP12544 262 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 TNFAIP3P21580 790 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 ALAS2P22557 587 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 SCNN1GP51170 649 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 VAV2P52735 878 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 CDH8P55286 799 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 GRIK3Q13003 919 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 UPP1Q16831 310 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
RTN1-203ENST00000395090 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
RTN1-203ENST00000395090 LNX1Q8TBB1 728 aaPredicted RBP12.13□□□□□ -0.47
RTN1-203ENST00000395090 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 SLC20A1Q8WUM9 679 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 ATRIPQ8WXE1 791 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 TRIM43Q96BQ3 446 aaPredicted RBP12.13□□□□□ -0.47
RTN1-203ENST00000395090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.13□□□□□ -0.47
RTN1-203ENST00000395090 GOLGA2P5Q9HBQ8 144 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 TET1Q8NFU7 2136 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
RTN1-203ENST00000395090 SCN1AP35498 2009 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.12□□□□□ -0.47
RTN1-203ENST00000395090 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 CILPO75339 1184 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 TUBB4AP04350 444 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 PAEPP09466 180 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
RTN1-203ENST00000395090 PAX3P23760 479 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 MAGEA1P43355 309 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 TAF6P49848 677 aa12.12□□□□□ -0.47
RTN1-203ENST00000395090 PDE6CP51160 858 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms