RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZMIZ2Q8NF64 920 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 EEF2KMTQ96G04 330 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 SPATA17Q96L03 361 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 C8orf48Q96LL4 319 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 CNTNAP3BQ96NU0 1288 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 TWNKQ96RR1 684 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 IER2Q9BTL4 223 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 CNTNAP3Q9BZ76 1288 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 RNF38Q9H0F5 515 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 EPC1Q9H2F5 836 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 LINC00597Q9H2U6 94 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 EBF3Q9H4W6 596 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.96e-6■■■■■ 48.1
ATG4A-205ENST00000394892 TDP1Q9NUW8 608 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 MAGEC2Q9UBF1 373 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-205ENST00000394892 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 CACNA1AO00555 2505 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF292O60281 2723 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 FRYLO94915 3013 aa9.45□□□□□ -0.9
ATG4A-205ENST00000394892 DCHS1Q96JQ0 3298 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF840PA6NDX5 716 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 K7ESF4 209 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 DPYSL4O14531 572 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 TNFRSF10BO14763 440 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 BEST1O76090 585 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 ASS1P00966 412 aaKnown RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 HLA-DRAP01903 254 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 MYL1P05976 194 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 ATICP31939 592 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 ASPAP45381 313 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 KPNA1P52294 538 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 PMS1P54277 932 aaKnown RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 CYP27A1Q02318 531 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 USP4Q13107 963 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF268Q14587 947 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 KCNB1Q14721 858 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 TAF12Q16514 161 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 NFIL3Q16649 462 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 FSTL4Q6MZW2 842 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 VSTM1Q6UX27 236 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 SCARA5Q6ZMJ2 495 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 YAF2Q8IY57 180 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 FUKQ8N0W3 1084 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 GUF1Q8N442 669 aaKnown RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 SCAMP5Q8TAC9 235 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 GOLGA5Q8TBA6 731 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 WHAMMQ8TF30 809 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 MRPS31Q92665 395 aaKnown RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 SEMA4DQ92854 862 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 WBP2Q969T9 261 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 KCNK16Q96T55 309 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 SCAND2PQ9GZW5 306 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 C8orf33Q9H7E9 229 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-205ENST00000394892 IL37Q9NZH6 218 aa9.44□□□□□ -0.9
ATG4A-205ENST00000394892 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SOBPA7XYQ1 873 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 A8MXQ7 604 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 OLFM2O95897 454 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 TGM1P22735 817 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 DDX6P26196 483 aaKnown RBP eCLIP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 GRIK1P39086 918 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 GCLMP48507 274 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 TNNC1P63316 161 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 NOP14P78316 857 aaKnown RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 BIRC3Q13489 604 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 TRPC3Q13507 836 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 RUNX3Q13761 415 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 EML3Q32P44 896 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 ITPRIPL2Q3MIP1 535 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 TMEM196Q5HYL7 178 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 CEP135Q66GS9 1140 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 C4orf50Q6ZRC1 276 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 DENND5BQ6ZUT9 1274 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 ACOT1Q86TX2 421 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 RALGPS2Q86X27 583 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 C12orf29Q8N999 325 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 CSGALNACT1Q8TDX6 532 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SH3RF2Q8TEC5 729 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
ATG4A-205ENST00000394892 GCNAQ96QF7 691 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 SMOQ99835 787 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 TRPC7Q9HCX4 862 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 WNT6Q9Y6F9 365 aa9.43□□□□□ -0.9
ATG4A-205ENST00000394892 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 HHLA1C9JL84 531 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 TRDMT1O14717 391 aaKnown RBP9.42□□□□□ -0.9
ATG4A-205ENST00000394892 IKBKBO14920 756 aa9.42□□□□□ -0.9
ATG4A-205ENST00000394892 MAPK13O15264 365 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms