RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 TNRC6BQ9UPQ9 1833 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 C2orf78A6NCI8 922 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 ENGP17813 658 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 GJB2P29033 226 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 POLR2BP30876 1174 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 TFAMQ00059 246 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 RING1Q06587 406 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 HNRNPDQ14103 355 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 MAPRE1Q15691 268 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 VSTM1Q6UX27 236 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 PIP4P1Q86T03 277 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 SCN4BQ8IWT1 228 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 HDDC3Q8N4P3 179 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 CCDC33Q8N5R6 958 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 KRI1Q8N9T8 703 aaKnown RBP21.11■□□□□ 0.97
UPK3B-203ENST00000394849 TRPM5Q9NZQ8 1165 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 ITGA11Q9UKX5 1188 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 EXOC7Q9UPT5 735 aa21.11■□□□□ 0.97
UPK3B-203ENST00000394849 A0A0A0MRY4 1105 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 FAM221BA6H8Z2 402 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 GABRDO14764 452 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 HYAL3O43820 417 aaPredicted RBP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 LDHAP00338 332 aaKnown RBP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 ITGB3P05106 788 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 MAPK8P45983 427 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 ATXN3P54252 364 aaPredicted RBP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 SIM1P81133 766 aaPredicted RBP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 SEMA3BQ13214 749 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 ZC2HC1CQ53FD0 456 aaPredicted RBP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 LYSMD4Q5XG99 296 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 DPH6Q7L8W6 267 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 ZNF720Q7Z2F6 126 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 TTC30AQ86WT1 665 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 RASSF8Q8NHQ8 419 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 LRRC15Q8TF66 581 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 RAD54LQ92698 747 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 FNBP1Q96RU3 617 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 PNKPQ96T60 521 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 BLOC1S4Q9NUP1 217 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 BCCIPQ9P287 314 aaKnown RBP eCLIP21.1■□□□□ 0.97
UPK3B-203ENST00000394849 CACNA1EQ15878 2313 aa21.1■□□□□ 0.97
UPK3B-203ENST00000394849 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 TISP43B9A030 160 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 LEFTY2O00292 366 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 APODP05090 189 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 ACAT1P24752 427 aaKnown RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 SLC7A9P82251 487 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 RBP5P82980 135 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 MCM6Q14566 821 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 PREPLQ4J6C6 727 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 PEAR1Q5VY43 1037 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 KIAA1211LQ6NV74 962 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 FAM171BQ6P995 826 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 TMEM92Q6UXU6 159 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 ADGRF2Q8IZF7 708 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 ADGRG2Q8IZP9 1017 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 ALLCQ8N6M5 410 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 C1orf127Q8N9H9 656 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 IL17RCQ8NAC3 791 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 TXNDC5Q8NBS9 432 aaKnown RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 KCNV2Q8TDN2 545 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 MAGEC2Q9UBF1 373 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 SEL1LQ9UBV2 794 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 PILRBQ9UKJ0 227 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 CIZ1Q9ULV3 898 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 R3HCC1Q9Y3T6 440 aaKnown RBP21.09■□□□□ 0.97
UPK3B-203ENST00000394849 SNX9Q9Y5X1 595 aa21.09■□□□□ 0.97
UPK3B-203ENST00000394849 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 H3BQV1 296 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 AP5Z1O43299 807 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 KLF8O95600 359 aaPredicted RBP21.08■□□□□ 0.97
UPK3B-203ENST00000394849 BMP15O95972 392 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 CYP17A1P05093 508 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 ADSSP30520 456 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 TNFRSF4P43489 277 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 GFPT1Q06210 699 aaPredicted RBP21.08■□□□□ 0.97
UPK3B-203ENST00000394849 DUOXA1Q1HG43 343 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 ZNF423Q2M1K9 1284 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 GAB4Q2WGN9 574 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 DDX42Q86XP3 938 aaKnown RBP eCLIP21.08■□□□□ 0.97
UPK3B-203ENST00000394849 BRSK2Q8IWQ3 736 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 TMEFF1Q8IYR6 380 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 CSGALNACT2Q8N6G5 542 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 LARP4BQ92615 738 aaKnown RBP21.08■□□□□ 0.97
UPK3B-203ENST00000394849 SLC6A14Q9UN76 642 aa21.08■□□□□ 0.97
UPK3B-203ENST00000394849 KAT7O95251 611 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 ADH1CP00326 375 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 PLCG1P19174 1290 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 ANXA13P27216 316 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 LONP1P36776 959 aaKnown RBP21.07■□□□□ 0.96
UPK3B-203ENST00000394849 GRIA2P42262 883 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 PTGER3P43115 390 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 MYO1EQ12965 1108 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 DHCR24Q15392 516 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 MAP7D1Q3KQU3 841 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 SLC36A4Q6YBV0 504 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 DENND5BQ6ZUT9 1274 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 TRMT11Q7Z4G4 463 aaKnown RBP21.07■□□□□ 0.96
UPK3B-203ENST00000394849 FILIP1Q7Z7B0 1213 aa21.07■□□□□ 0.96
UPK3B-203ENST00000394849 RLN3Q8WXF3 142 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms