RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 PBXIP1Q96AQ6 731 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 SMARCD1Q96GM5 515 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 ZSWIM3Q96MP5 696 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 MED10Q9BTT4 135 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 RPP25Q9BUL9 199 aaKnown RBP9.09□□□□□ -0.95
APLF-202ENST00000394342 TTLL2Q9BWV7 592 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 NT5C1AQ9BXI3 368 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 ZNF518BQ9C0D4 1074 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 TASP1Q9H6P5 420 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.95
APLF-202ENST00000394342 HMGXB4Q9UGU5 601 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 FBXL21Q9UKT6 434 aa9.09□□□□□ -0.95
APLF-202ENST00000394342 MAGED2Q9UNF1 606 aaPredicted RBP9.09□□□□□ -0.95
APLF-202ENST00000394342 F8VP50 259 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 CLDN5O00501 218 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 LRRN2O75325 713 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 RTN3O95197 1032 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 AFPP02771 609 aaKnown RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 PFKLP17858 780 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 PSMC3P17980 439 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 TBXAS1P24557 533 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 PPP3CCP48454 512 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 YWHAEP62258 255 aaKnown RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 CYP4F8P98187 520 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 PFKPQ01813 784 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 KCNH2Q12809 1159 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 STXBP5Q5T5C0 1151 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 VITQ6UXI7 678 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 PAQR9Q6ZVX9 377 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 MON1AQ86VX9 555 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 ARID3BQ8IVW6 561 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 MFSD6LQ8IWD5 586 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 SUGP1Q8IWZ8 645 aaKnown RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 STKLD1Q8NE28 680 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 ST13P5Q8NFI4 369 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 DNASE1L2Q92874 299 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 TATDN2Q93075 761 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 DMAP1Q9NPF5 467 aaPredicted RBP9.08□□□□□ -0.96
APLF-202ENST00000394342 CISHQ9NSE2 258 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 TMEM30AQ9NV96 361 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 COMMD8Q9NX08 183 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 OBP2AQ9NY56 170 aa9.08□□□□□ -0.96
APLF-202ENST00000394342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.08□□□□□ -0.96
APLF-202ENST00000394342 FRYLO94915 3013 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 COL4A3Q01955 1670 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 USP34Q70CQ2 3546 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 EML5Q05BV3 1969 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 HEPACAM2A8MVW5 462 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 DPYSL4O14531 572 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 TADA3O75528 432 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 AP1G2O75843 785 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CFHP08603 1231 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CCDC130P13994 396 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CD58P19256 250 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 VIPR2P41587 438 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 PDE6CP51160 858 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CLCN5P51795 746 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CACNA2D1P54289 1103 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 GPC5P78333 572 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 ORC1Q13415 861 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CUL2Q13617 745 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 ZNF268Q14587 947 aaPredicted RBP9.07□□□□□ -0.96
APLF-202ENST00000394342 TPD52L1Q16890 204 aaPredicted RBP9.07□□□□□ -0.96
APLF-202ENST00000394342 DPCR1Q3MIW9 517 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 FAM114A1Q8IWE2 563 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CMTM8Q8IZV2 173 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 SIX5Q8N196 739 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 NUP93Q8N1F7 819 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 C12orf29Q8N999 325 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 SLC2A14Q8TDB8 520 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 SHDQ96IW2 340 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 NT5C1BQ96P26 610 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 MED15Q96RN5 788 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 HNRNPABQ99729 332 aaKnown RBP9.07□□□□□ -0.96
APLF-202ENST00000394342 TRMT61BQ9BVS5 477 aaKnown RBP9.07□□□□□ -0.96
APLF-202ENST00000394342 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 KCNH6Q9H252 994 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 MFSD1Q9H3U5 465 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 THAP9Q9H5L6 903 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 KIF9Q9HAQ2 790 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CSNK1G1Q9HCP0 422 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 TRPV5Q9NQA5 729 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 CA14Q9ULX7 337 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 HCN4Q9Y3Q4 1203 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 PIEZO1Q92508 2521 aa9.07□□□□□ -0.96
APLF-202ENST00000394342 NCANO14594 1321 aa9.06□□□□□ -0.96
APLF-202ENST00000394342 CEP192Q8TEP8 1941 aa9.06□□□□□ -0.96
APLF-202ENST00000394342 TRAV19A0A0A6YYK7 116 aa9.06□□□□□ -0.96
APLF-202ENST00000394342 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
APLF-202ENST00000394342 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms