RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CRYBB1P53674 252 aaPredicted RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 GDF10P55107 478 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 OTUD4Q01804 1114 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 HADHQ16836 314 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 SPDYCQ5MJ68 293 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 TWF2Q6IBS0 349 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 SYDE1Q6ZW31 735 aaPredicted RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 ACTL9Q8TC94 416 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 IPO4Q8TEX9 1081 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 C9orf72Q96LT7 481 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 TRAIPQ9BWF2 469 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 CALN1Q9BXU9 219 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 MAGEB5Q9BZ81 275 aa15.83■□□□□ 0.12
GPC3-202ENST00000394299 UBQLN1Q9UMX0 589 aaKnown RBP15.83■□□□□ 0.12
GPC3-202ENST00000394299 KPNA7A9QM74 516 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 ATP2C2O75185 946 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 RNF8O76064 485 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 LSP1P33241 339 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 EIF3BP55884 814 aaKnown RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 GSCP56915 257 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 OASLQ15646 514 aaKnown RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 NBPF20Q3BBV1 942 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 CCDC14Q49A88 953 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 CCDC38Q502W7 563 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 AGBL2Q5U5Z8 902 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 EMC10Q5UCC4 262 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 NPNTQ6UXI9 565 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 CYP4V2Q6ZWL3 525 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 POLNQ7Z5Q5 900 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 ALLCQ8N6M5 410 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 CCDC89Q8N998 374 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 SLC35F5Q8WV83 523 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 TRIB2Q92519 343 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 ANKRD65E5RJM6 399 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 SGK1O00141 431 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 PAPSS1O43252 624 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 KRT7P08729 469 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 AKR1A1P14550 325 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 PECAM1P16284 738 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 GPD1P21695 349 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 GNL1P36915 607 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 ZNF143P52747 638 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 VCPP55072 806 aaKnown RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 COPS2P61201 443 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 GPS1Q13098 491 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 GDF6Q6KF10 455 aaPredicted RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 SCYL2Q6P3W7 929 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 LRRC52Q8N7C0 313 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 LRRN4Q8WUT4 740 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 NDRG1Q92597 394 aaKnown RBP15.82■□□□□ 0.12
GPC3-202ENST00000394299 TLCD1Q96CP7 247 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 SLC12A6Q9UHW9 1150 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 KIAA1257Q9ULG3 409 aa15.82■□□□□ 0.12
GPC3-202ENST00000394299 ZNF236Q9UL36 1845 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 CCT5P48643 541 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 ATXN1P54253 815 aaKnown RBP15.81■□□□□ 0.12
GPC3-202ENST00000394299 PPP2R2AP63151 447 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 GAD2Q05329 585 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 MTM1Q13496 603 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 FAM47CQ5HY64 1035 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 OLFML1Q6UWY5 402 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 APBB1IPQ7Z5R6 666 aaPredicted RBP15.81■□□□□ 0.12
GPC3-202ENST00000394299 RFX6Q8HWS3 928 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 CMASQ8NFW8 434 aaPredicted RBP15.81■□□□□ 0.12
GPC3-202ENST00000394299 LPPQ93052 612 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 ADAM33Q9BZ11 813 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 PPANQ9NQ55 473 aaKnown RBP15.81■□□□□ 0.12
GPC3-202ENST00000394299 CTNNAL1Q9UBT7 734 aa15.81■□□□□ 0.12
GPC3-202ENST00000394299 PTGESO14684 152 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 ACAT1P24752 427 aaKnown RBP15.8■□□□□ 0.12
GPC3-202ENST00000394299 AXLP30530 894 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 RABGGTBP53611 331 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 ZC3H12AQ5D1E8 599 aaKnown RBP15.8■□□□□ 0.12
GPC3-202ENST00000394299 HIBCHQ6NVY1 386 aaPredicted RBP15.8■□□□□ 0.12
GPC3-202ENST00000394299 SLC35B2Q8TB61 432 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 NGRNQ9NPE2 291 aaKnown RBP15.8■□□□□ 0.12
GPC3-202ENST00000394299 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.8■□□□□ 0.12
GPC3-202ENST00000394299 ASNSD1Q9NWL6 643 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 NINJ2Q9NZG7 142 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 Q9Y3F1 56 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 CDY2AQ9Y6F7 541 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 GOLGA8MH3BSY2 632 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 MAP3K6O95382 1288 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 RARBP10826 455 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 LCP1P13796 627 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 HOXC8P31273 242 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 AUHQ13825 339 aaKnown RBP15.8■□□□□ 0.12
GPC3-202ENST00000394299 OSTM1Q86WC4 334 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 SOCS4Q8WXH5 440 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 SLC4A5Q9BY07 1137 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 FAM107BQ9H098 131 aa15.8■□□□□ 0.12
GPC3-202ENST00000394299 RASGRF2O14827 1237 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 RGS16O15492 202 aaPredicted RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
GPC3-202ENST00000394299 BANF1O75531 89 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 TTC4O95801 387 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 PTPN7P35236 360 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 FLT3LGP49771 235 aa15.79■□□□□ 0.12
GPC3-202ENST00000394299 CDH6P55285 790 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms