RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 A0A088AWK7 358 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 TGFB1I1O43294 461 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 USP1O94782 785 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 HSPA13P48723 471 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 MYLK3Q32MK0 819 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 APOBEC3FQ8IUX4 373 aaKnown RBP22.74■■□□□ 1.23
CLDND1-202ENST00000394180 METTL25Q8N6Q8 603 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 PRR11Q96HE9 360 aaPredicted RBP22.74■■□□□ 1.23
CLDND1-202ENST00000394180 PFDN4Q9NQP4 134 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 DMAC2Q9NW81 257 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 STRIP2Q9ULQ0 834 aa22.74■■□□□ 1.23
CLDND1-202ENST00000394180 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-202ENST00000394180 AOC1P19801 751 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 SLC5A2P31639 672 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 ETV4P43268 484 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 SLFN12Q8IYM2 578 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 CEP70Q8NHQ1 597 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 LMO3Q8TAP4 145 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 SLC20A1Q8WUM9 679 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 PWWP2AQ96N64 755 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 CCDC106Q9BWC9 280 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 C6orf203Q9P0P8 240 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-202ENST00000394180 FAF1Q9UNN5 650 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-202ENST00000394180 SHOC2Q9UQ13 582 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 POTEB3A0JP26 581 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 TBC1D12O60347 775 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 EPHX2P34913 555 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 POTEBQ6S5H4 581 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 SIAH1Q8IUQ4 282 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 PIGSQ96S52 555 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 REEP2Q9BRK0 252 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 ZHX3Q9H4I2 956 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 CNTN3Q9P232 1028 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 DNM3Q9UQ16 869 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 MAD1L1Q9Y6D9 718 aa22.73■■□□□ 1.23
CLDND1-202ENST00000394180 H3BNX3 289 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 GOLGA8HP0CJ92 632 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 EEF2P13639 858 aaKnown RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CDH2P19022 906 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CPOXP36551 454 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 TRIP13Q15645 432 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 PGM2L1Q6PCE3 622 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 MOXD1Q6UVY6 613 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 TMEM179Q6ZVK1 233 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 TTC7BQ86TV6 843 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 NLRX1Q86UT6 975 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 TREML1Q86YW5 311 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 RAB3IL1Q8TBN0 382 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 LBHD1Q9BQE6 289 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 ADAMTS6Q9UKP5 1117 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 SQORQ9Y6N5 450 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 ENO1P06733 434 aaKnown RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 SERPINA6P08185 405 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CDK9P50750 372 aaKnown RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 NUP107P57740 925 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CACNB1Q02641 598 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-202ENST00000394180 RELAQ04206 551 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CETN1Q12798 172 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 FBXL19Q6PCT2 694 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 SLC9A9Q8IVB4 645 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 MBOAT7Q96N66 472 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 ANO3Q9BYT9 981 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 GLT8D2Q9H1C3 349 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 VPS37BQ9H9H4 285 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CEPT1Q9Y6K0 416 aa22.72■■□□□ 1.23
CLDND1-202ENST00000394180 CCDC160A6NGH7 325 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 PMM2O15305 246 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 ZNF12P17014 697 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 NCKAP1LP55160 1127 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 USP17L2Q6R6M4 530 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 RNF111Q6ZNA4 994 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 ATP11CQ8NB49 1132 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 ATG4AQ8WYN0 398 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 CCT7Q99832 543 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 HAUS8Q9BT25 410 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 NOCTQ9UK39 431 aaKnown RBP22.71■■□□□ 1.23
CLDND1-202ENST00000394180 EFR3BQ9Y2G0 817 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 FRMD4BQ9Y2L6 1034 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 ZNF711Q9Y462 761 aa22.71■■□□□ 1.23
CLDND1-202ENST00000394180 CYP3A7-CYP3A51PA0A087WV96 503 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CYP3A7P24462 503 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 COG7P83436 770 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 SLC18A2Q05940 514 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CLPPQ16740 277 aaPredicted RBP22.7■■□□□ 1.23
CLDND1-202ENST00000394180 ARHGAP44Q17R89 818 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CBWD6Q4V339 395 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CBWD3Q5JTY5 395 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CBWD5Q5RIA9 395 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 RWDD4Q6NW29 188 aaKnown RBP22.7■■□□□ 1.23
CLDND1-202ENST00000394180 SGF29Q96ES7 293 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 COX4I2Q96KJ9 171 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 CPVLQ9H3G5 476 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 STN1Q9H668 368 aaKnown RBP22.7■■□□□ 1.23
CLDND1-202ENST00000394180 RSL24D1Q9UHA3 163 aaKnown RBP22.7■■□□□ 1.23
CLDND1-202ENST00000394180 DTNAQ9Y4J8 743 aa22.7■■□□□ 1.23
CLDND1-202ENST00000394180 USP17L5A8MUK1 530 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 ADM5C9JUS6 153 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 RPA1P27694 616 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 PEX2P28328 305 aa22.7■■□□□ 1.22
CLDND1-202ENST00000394180 TMEM53Q6P2H8 277 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms