RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PBX4Q9BYU1 374 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 CSNK1G1Q9HCP0 422 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 OSGEPQ9NPF4 335 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 CTTNBP2NLQ9P2B4 639 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 COG5Q9UP83 839 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 LZTS1Q9Y250 596 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 MTMR11A4FU01 709 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 MOCS3O95396 460 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 VNN2O95498 520 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 TAP1Q03518 808 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 PTPN14Q15678 1187 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 CFAP221Q4G0U5 840 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 NYAP1Q6ZVC0 841 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 TMEM110Q86TL2 294 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 XYLT1Q86Y38 959 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 SPPL3Q8TCT6 385 aa25.61■■□□□ 1.69
LRFN4-202ENST00000393952 FUBP3Q96I24 572 aaKnown RBP eCLIP25.61■■□□□ 1.69
LRFN4-202ENST00000393952 C16orf45Q96MC5 204 aaPredicted RBP25.61■■□□□ 1.69
LRFN4-202ENST00000393952 TGS1Q96RS0 853 aaKnown RBP25.61■■□□□ 1.69
LRFN4-202ENST00000393952 DMAP1Q9NPF5 467 aaPredicted RBP25.61■■□□□ 1.69
LRFN4-202ENST00000393952 WDR27A2RRH5 827 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 LILRB3O75022 631 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 NOP2P46087 812 aaKnown RBP25.6■■□□□ 1.69
LRFN4-202ENST00000393952 RPL34P49207 117 aaKnown RBP25.6■■□□□ 1.69
LRFN4-202ENST00000393952 RANBP2P49792 3224 aaKnown RBP25.6■■□□□ 1.69
LRFN4-202ENST00000393952 NAP1L1P55209 391 aaKnown RBP25.6■■□□□ 1.69
LRFN4-202ENST00000393952 PLEKHA7Q6IQ23 1121 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 RHOT2Q8IXI1 618 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 GPR65Q8IYL9 337 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 TTC9BQ8N6N2 239 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 HSFY1Q96LI6 401 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 NUP85Q9BW27 656 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 STRIP2Q9ULQ0 834 aa25.6■■□□□ 1.69
LRFN4-202ENST00000393952 PATJQ8NI35 1801 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 F8VP50 259 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 GOLGA8SH3BPF8 625 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 GJB6O95452 261 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 RB1P06400 928 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 DNAJB1P25685 340 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 ERVK-21P61565 698 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 SMARCB1Q12824 385 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 TMC7Q7Z402 723 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 POF1BQ8WVV4 589 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 NKX2-4Q9H2Z4 354 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 ABCB6Q9NP58 842 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 CYLDQ9NQC7 956 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 CAPN6Q9Y6Q1 641 aa25.59■■□□□ 1.69
LRFN4-202ENST00000393952 TCRBV5S1A1TA0A578 114 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 HHLA1C9JL84 531 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 KIF5CO60282 957 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 CAPN15O75808 1086 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 LCP1P13796 627 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 CA8P35219 290 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 ACADSBP45954 432 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 ERVFC1P60507 584 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 MAMLD1Q13495 774 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 ZNF268Q14587 947 aaPredicted RBP25.58■■□□□ 1.69
LRFN4-202ENST00000393952 TCEAL1Q15170 157 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 OR6B2Q6IFH4 312 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 DNAJC24Q6P3W2 148 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 FAM183BPQ6ZVS7 135 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 GPRIN1Q7Z2K8 1008 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 TDHQ8IZJ6 230 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 RNF10Q8N5U6 811 aaKnown RBP25.58■■□□□ 1.69
LRFN4-202ENST00000393952 SPPL2BQ8TCT7 592 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 KCTD13Q8WZ19 329 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 SAMD11Q96NU1 681 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 C11orf84Q9BUA3 381 aaPredicted RBP25.58■■□□□ 1.69
LRFN4-202ENST00000393952 UBXN6Q9BZV1 441 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 CRISPLD1Q9H336 500 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 RXFP1Q9HBX9 757 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.58■■□□□ 1.69
LRFN4-202ENST00000393952 UVRAGQ9P2Y5 699 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 MSRAQ9UJ68 235 aa25.58■■□□□ 1.69
LRFN4-202ENST00000393952 CSPG5O95196 566 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 CXCL14O95715 111 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 GRIK1P39086 918 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 MAGEA11P43364 429 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 GSCP56915 257 aaPredicted RBP25.57■■□□□ 1.68
LRFN4-202ENST00000393952 SNX16P57768 344 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 RAB30Q15771 203 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 VSTM1Q6UX27 236 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 SCN4BQ8IWT1 228 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 C3orf20Q8ND61 904 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 ZNF564Q8TBZ8 553 aaPredicted RBP25.57■■□□□ 1.68
LRFN4-202ENST00000393952 C2orf15Q8WU43 125 aaKnown RBP25.57■■□□□ 1.68
LRFN4-202ENST00000393952 TCF25Q9BQ70 676 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 MIS12Q9H081 205 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 PARVAQ9NVD7 372 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 FNIP2Q9P278 1114 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 WDR35Q9P2L0 1181 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 SSX2IPQ9Y2D8 614 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 SLC27A5Q9Y2P5 690 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 SCINQ9Y6U3 715 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 CHD9Q3L8U1 2897 aa25.57■■□□□ 1.68
LRFN4-202ENST00000393952 GRM6O15303 877 aa25.56■■□□□ 1.68
LRFN4-202ENST00000393952 TEX28O15482 410 aa25.56■■□□□ 1.68
LRFN4-202ENST00000393952 PAPSS1O43252 624 aaPredicted RBP25.56■■□□□ 1.68
LRFN4-202ENST00000393952 MTA2O94776 668 aa25.56■■□□□ 1.68
LRFN4-202ENST00000393952 CREMQ03060 361 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms