RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 DSC1Q08554 894 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 TAF5Q15542 800 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 ATP13A4Q4VNC1 1196 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 WDR93Q6P2C0 686 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 ZDHHC17Q8IUH5 632 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 KATNAL2Q8IYT4 538 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 NIPA2Q8N8Q9 360 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CCDC26Q8TAB7 109 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 MYCBPAPQ8TBZ2 947 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 FNIP1Q8TF40 1166 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 PAWRQ96IZ0 340 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 PIWIL1Q96J94 861 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 SUSD3Q96L08 255 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 HSFY1Q96LI6 401 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 ARFGAP3Q9NP61 516 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 KRT82Q9NSB4 513 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 STIM2Q9P246 746 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 NR2E1Q9Y466 385 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 TCRBV7S2A1N4TA0A589 114 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CCDC151A5D8V7 595 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 TBKBP1A7MCY6 615 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PI4K2BG5E9Z4 385 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 HOXA2O43364 376 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 GABBR2O75899 941 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 BEST1O76090 585 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 SEC31AO94979 1220 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 HEXIM1O94992 359 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 UPP2O95045 317 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CYP11A1P05108 521 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 DESP17661 470 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 FLT3P36888 993 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PLA2G4AP47712 749 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 GJA8P48165 433 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 ZNF143P52747 638 aaPredicted RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 RABGGTBP53611 331 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 BCAR1P56945 870 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 TSPY1Q01534 308 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PLCB3Q01970 1234 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 GUCY2DQ02846 1103 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PKN2Q16513 984 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 CDO1Q16878 200 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PAQR9Q6ZVX9 377 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PIGZQ86VD9 579 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 RCOR2Q8IZ40 523 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 EXD1Q8NHP7 514 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 SPATA18Q8TC71 538 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CLEC4CQ8WTT0 213 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 MAGOHBQ96A72 148 aaKnown RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 ARMC5Q96C12 935 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 ACSF2Q96CM8 615 aaPredicted RBP9.08□□□□□ -0.96
TDP1-203ENST00000393454 PCED1BQ96HM7 432 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CASD1Q96PB1 797 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 RTP3Q9BQQ7 232 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 HEMGNQ9BXL5 484 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 C11orf49Q9H6J7 331 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 LRRC4Q9HBW1 653 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PCSK1NQ9UHG2 260 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 AMACRQ9UHK6 382 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 PCDHB8Q9UN66 801 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 TANC1Q9C0D5 1861 aa9.08□□□□□ -0.96
TDP1-203ENST00000393454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.07□□□□□ -0.96
TDP1-203ENST00000393454 C2CD4BA6NLJ0 364 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 TRAPPC3O43617 180 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 LRCH4O75427 683 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 CXCL10P02778 98 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 ALDH2P05091 517 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 KRT7P08729 469 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 CLTBP09497 229 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 RARAP10276 462 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 RALAP11233 206 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 TYMPP19971 482 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 SDC4P31431 198 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 ATP11AP98196 1134 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 YWHAHQ04917 246 aaPredicted RBP9.07□□□□□ -0.96
TDP1-203ENST00000393454 ADIGQ0VDE8 80 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 ACAP1Q15027 740 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 PPP2R5EQ16537 467 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 C15orf59Q2T9L4 293 aaPredicted RBP9.07□□□□□ -0.96
TDP1-203ENST00000393454 SMTNL2Q2TAL5 461 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 INTS6LQ5JSJ4 861 aaKnown RBP9.07□□□□□ -0.96
TDP1-203ENST00000393454 LRRC38Q5VT99 294 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 KAZNQ674X7 775 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 TXNRD3NBQ6F5E7 133 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 CLEC20AQ6ZU45 233 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 MAATS1Q7Z4T9 603 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 NPAS4Q8IUM7 802 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 IFT20Q8IY31 132 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 SIX6OS1Q8N1H7 587 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 MAIP1Q8WWC4 291 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 IFT81Q8WYA0 676 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 MYLPFQ96A32 169 aa9.07□□□□□ -0.96
TDP1-203ENST00000393454 RBM41Q96IZ5 413 aaKnown RBP9.07□□□□□ -0.96
TDP1-203ENST00000393454 CFAP57Q96MR6 1250 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms