RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 TMEM196Q5HYL7 178 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 TXNDC11Q6PKC3 985 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 MAEAQ7L5Y9 396 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 SYT13Q7L8C5 426 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 CEP76Q8TAP6 659 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 SHKBP1Q8TBC3 707 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 DYDC2Q96IM9 177 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 LPIN3Q9BQK8 851 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 ABCB6Q9NP58 842 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 RGL1Q9NZL6 768 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 EVLQ9UI08 416 aaPredicted RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 GDF2Q9UK05 429 aaPredicted RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 FBXL5Q9UKA1 691 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 STARD13Q9Y3M8 1113 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
CASP4-201ENST00000393150 PHLPP2Q6ZVD8 1323 aa8.57□□□□□ -1.04
CASP4-201ENST00000393150 ACKR2O00590 384 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TRDMT1O14717 391 aaKnown RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 OPHN1O60890 802 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 DEXIO95424 95 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 SEC24AO95486 1093 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TOP3BO95985 862 aaKnown RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 IGHDP01880 384 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 EPXP11678 715 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 BRCC3P46736 316 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TUFMP49411 452 aaKnown RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 IRX4P78413 519 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 INSM1Q01101 510 aaPredicted RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 EXOSC10Q01780 885 aaKnown RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 YWHAHQ04917 246 aaPredicted RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 GFPT1Q06210 699 aaPredicted RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 RUNX3Q13761 415 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 DMC1Q14565 340 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 INF2Q27J81 1249 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 COL28A1Q2UY09 1125 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 GLRA4Q5JXX5 417 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 NEK8Q86SG6 692 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TTC30AQ86WT1 665 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 CPA6Q8N4T0 437 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TMEM102Q8N9M5 508 aaPredicted RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 LRIG1Q96JA1 1093 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 ZFYVE19Q96K21 471 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 P2RY13Q9BPV8 354 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TCHPQ9BT92 498 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 LSG1Q9H089 658 aaKnown RBP8.56□□□□□ -1.04
CASP4-201ENST00000393150 FZD8Q9H461 694 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 PDZD7Q9H5P4 517 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TASP1Q9H6P5 420 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 GKN1Q9NS71 199 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 CEP72Q9P209 647 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 KLK13Q9UKR3 277 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 PCDHA12Q9UN75 941 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 WASF3Q9UPY6 502 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 WDR81Q562E7 1941 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
CASP4-201ENST00000393150 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 SPAARA0A1B0GVQ0 90 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 CAPN8A6NHC0 703 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 OR6C75A6NL08 312 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 METTL12A8MUP2 240 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 UPK3BL1B0FP48 263 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 UPK3BL2E5RIL1 263 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 DCLK1O15075 740 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 USO1O60763 962 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 SLITRK3O94933 977 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 CFIP05156 583 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 SYPP08247 313 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 IFNAR1P17181 557 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 DDX6P26196 483 aaKnown RBP eCLIP8.55□□□□□ -1.04
CASP4-201ENST00000393150 GABRR2P28476 465 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 GRIA4P48058 902 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 TNK2Q07912 1038 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 SCAPQ12770 1279 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 PDGFRLQ15198 375 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 PMS2CLQ68D20 193 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 Q6ZUG5 572 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 DNAJB7Q7Z6W7 309 aaPredicted RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 SYT12Q8IV01 421 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 CHCHD4Q8N4Q1 142 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 RPLP0P6Q8NHW5 317 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 ACAP3Q96P50 834 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 PPP1R10Q96QC0 940 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 EIF2AK1Q9BQI3 630 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 GTPBP2Q9BX10 602 aaKnown RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
CASP4-201ENST00000393150 BRMS1Q9HCU9 246 aa8.55□□□□□ -1.04
CASP4-201ENST00000393150 C2orf42Q9NWW7 574 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms