RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RANBP17Q9H2T7 1088 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 CRISPLD1Q9H336 500 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 TM7SF3Q9NS93 570 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ABCB8Q9NUT2 735 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 SLC8A2Q9UPR5 921 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CLCA2Q9UQC9 943 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 EPN1Q9Y6I3 576 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 A0A088AWK7 358 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 A0A1W2PPC4 97 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 K7ESF4 209 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 NRP2O60462 931 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 VEGFAP15692 232 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 CD68P34810 354 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 STAT5AP42229 794 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GSTM5P46439 218 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 BMXP51813 675 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 STAT2P52630 851 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 HK3P52790 923 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CHRNDQ07001 517 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CETN1Q12798 172 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 SNAPC2Q13487 334 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 TPD52L1Q16890 204 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD39Q53RE8 183 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 SFRP5Q5T4F7 317 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GKAP1Q5VSY0 366 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 SNX30Q5VWJ9 437 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 LIN54Q6MZP7 749 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 FSTL4Q6MZW2 842 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CYP4F22Q6NT55 531 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 KLHL35Q6PF15 583 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 CCDC186Q7Z3E2 898 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 Q8NFD4 153 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 UBASH3BQ8TF42 649 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 THAP4Q8WY91 577 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 DNAI1Q9UI46 699 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 PGRMC2O15173 223 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ANXA1P04083 346 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 TMEM11P17152 192 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GJA1P17302 382 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 MALP21145 153 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 MXI1P50539 228 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 KRT85P78386 507 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 TRIM25Q14258 630 aaKnown RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 RCN1Q15293 331 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 IRGCQ6NXR0 463 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ZPBP2Q6X784 338 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 HPS1Q92902 700 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 NUF2Q9BZD4 464 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 GREM2Q9H772 168 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ERVMER34-1Q9H9K5 563 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 C17orf75Q9HAS0 396 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 ACTR3BQ9P1U1 418 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 FBXL7Q9UJT9 491 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 MTUS1Q9ULD2 1270 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 C19orf53Q9UNZ5 99 aaPredicted RBP3.77□□□□□ -1.81
XRN1-202ENST00000392981 DNAJC16Q9Y2G8 782 aa3.77□□□□□ -1.81
XRN1-202ENST00000392981 C2orf81A6NN90 581 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SLC7A4O43246 635 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TADA2AO75478 443 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 NCF1P14598 390 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ACSL1P33121 698 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TXKP42681 527 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 VPS41P49754 854 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PPP5CP53041 499 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CDK5R2Q13319 367 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PKDCCQ504Y2 493 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 EXOSC6Q5RKV6 272 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 DCAF12L1Q5VU92 463 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CHST9Q7L1S5 443 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 WDTC1Q8N5D0 677 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 FAM71DQ8N9W8 422 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 KREMEN2Q8NCW0 462 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PIP5K1AQ99755 562 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 LIN28AQ9H9Z2 209 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 RRAGCQ9HB90 399 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RBM12Q9NTZ6 932 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ARHGEF38Q9NXL2 777 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 WDR37Q9Y2I8 494 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 V9GYY5 206 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3DA0A087WVF3 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3IA0A087WXS9 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3EA0A087X179 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3KA0A087X1G2 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RGSL1A5PLK6 1076 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3BA6NDS4 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3FA6NER0 549 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3LB9A6J9 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PEX11AO75192 247 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CIB2O75838 187 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CBX6O95503 412 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TPOP07202 933 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3HP0C7X1 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ENDOUP21128 410 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 DRD1P21728 446 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 POU1F1P28069 291 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PBLDP30039 288 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ARF5P84085 180 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 MAP2K1Q02750 393 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ACTN3Q08043 901 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 VEPH1Q14D04 833 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms