RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HAPLN3Q96S86 360 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 PCDHB18PQ96TA0 734 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 AGPAT1Q99943 283 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 XYLT2Q9H1B5 865 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 RNF39Q9H2S5 420 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 ARHGEF3Q9NR81 526 aa19.94■□□□□ 0.78
CCDC50-202ENST00000392456 SEPT11Q9NVA2 429 aaKnown RBP19.94■□□□□ 0.78
CCDC50-202ENST00000392456 EIF3FO00303 357 aaPredicted RBP19.93■□□□□ 0.78
CCDC50-202ENST00000392456 KRT5P13647 590 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 AKAP5P24588 427 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 VARSP26640 1264 aaKnown RBP19.93■□□□□ 0.78
CCDC50-202ENST00000392456 GRK4P32298 578 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 ACLYP53396 1101 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 PPARDQ03181 441 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 CUL2Q13617 745 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 PIGWQ7Z7B1 504 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 CTNNBL1Q8WYA6 563 aaPredicted RBP19.93■□□□□ 0.78
CCDC50-202ENST00000392456 ZMAT2Q96NC0 199 aaKnown RBP19.93■□□□□ 0.78
CCDC50-202ENST00000392456 ECT2Q9H8V3 914 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 HSFX1Q9UBD0 423 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 PLAAQ9Y263 795 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 EFR3BQ9Y2G0 817 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 TRIP11Q15643 1979 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 MROH7Q68CQ1 1323 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 MYH10P35580 1976 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 ATP9BO43861 1147 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 HNRNPCP07910 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCDC50-202ENST00000392456 SERPINB4P48594 390 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 NOTUMQ6P988 496 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 LRIG3Q6UXM1 1119 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 NANOGNBQ7Z5D8 188 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 UCMAQ8WVF2 138 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 ITGB1BP2Q9UKP3 347 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 SNX12Q9UMY4 172 aa19.93■□□□□ 0.78
CCDC50-202ENST00000392456 TRIM43BA6NCK2 446 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 IL18RAPO95256 599 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 GNRH1P01148 92 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 MMEP08473 750 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 KRT19P08727 400 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 CYP11B1P15538 503 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 GBP1P32455 592 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 MRPS6P82932 125 aaKnown RBP19.92■□□□□ 0.78
CCDC50-202ENST00000392456 GSTM4Q03013 218 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 SURF1Q15526 300 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 UBXN11Q5T124 520 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 RNF180Q86T96 592 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 RSPH1Q8WYR4 309 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 APOL6Q9BWW8 343 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 TNFAIP3P21580 790 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 GRM5P41594 1212 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 AP3M2P53677 418 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 ITGA7Q13683 1181 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 DUS1LQ6P1R4 473 aaKnown RBP19.92■□□□□ 0.78
CCDC50-202ENST00000392456 DDX1Q92499 740 aaKnown RBP19.92■□□□□ 0.78
CCDC50-202ENST00000392456 ANKRD36BP1Q96IX9 119 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 GDF3Q9NR23 364 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
CCDC50-202ENST00000392456 LSM1O15116 133 aaKnown RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 UBOX5O94941 541 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 ITGB3P05106 788 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SPATA31D3P0C874 917 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 MYZAPP0CAP1 466 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 CD97P48960 835 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 CARSP49589 748 aaKnown RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 RAD23BP54727 409 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 TRPC3Q13507 836 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SMUG1Q53HV7 270 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SPATA31D4Q6ZUB0 917 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 LRRC43Q8N309 656 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 PCSK9Q8NBP7 692 aaKnown RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 WDR60Q8WVS4 1066 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 HMX1Q9NP08 348 aaPredicted RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 CROTQ9UKG9 612 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 NFU1Q9UMS0 254 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 hCG_2014768A0A024R1R8 64 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 TNNC2P02585 160 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 WEE2P0C1S8 567 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 CALB2P22676 271 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SSTR3P32745 418 aaPredicted RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 FMO1Q01740 532 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 GUCY2DQ02846 1103 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 GLRA4Q5JXX5 417 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SCARA5Q6ZMJ2 495 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 VPS36Q86VN1 386 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 RNF25Q96BH1 459 aaPredicted RBP19.91■□□□□ 0.78
CCDC50-202ENST00000392456 KLHL29Q96CT2 875 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 RNPEPL1Q9HAU8 725 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 ABCF3Q9NUQ8 709 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 SAGE1Q9NXZ1 904 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 KLK14Q9P0G3 267 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 POLIQ9UNA4 740 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 STK38LQ9Y2H1 464 aa19.91■□□□□ 0.78
CCDC50-202ENST00000392456 CFHP08603 1231 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 THPOP40225 353 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 GALCP54803 685 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 GALNTL6Q49A17 601 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 TMEM270Q6UE05 265 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 IFT20Q8IY31 132 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 SLAIN1Q8ND83 568 aa19.9■□□□□ 0.78
CCDC50-202ENST00000392456 DNAJC9Q8WXX5 260 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms