RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 CCDC50Q8IVM0 306 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 URGCPQ8TCY9 931 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RSPH1Q8WYR4 309 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RBM41Q96IZ5 413 aaKnown RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RTP3Q9BQQ7 232 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 HERPUD2Q9BSE4 406 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 CNPY3Q9BT09 278 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 DDX56Q9NY93 547 aaKnown RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 DSEQ9UL01 958 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 MYBPHLA2RUH7 354 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 BHMG1C9JSJ3 638 aaPredicted RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 TTI1O43156 1089 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 B4GALT3O60512 393 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 GRAP2O75791 330 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 RNF8O76064 485 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 ITGB1P05556 798 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 NPR3P17342 541 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 IL1R2P27930 398 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 FLT3P36888 993 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 CETN2P41208 172 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 CARSP49589 748 aaKnown RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 SLC8A3P57103 927 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
TMCO1-202ENST00000392129 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 METTL23Q86XA0 190 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 COLGALT2Q8IYK4 626 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 APBB2Q92870 758 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 SUSD3Q96L08 255 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 SLITRK1Q96PX8 696 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 ACBD6Q9BR61 282 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 HIPK3Q9H422 1215 aa12.88□□□□□ -0.35
TMCO1-202ENST00000392129 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 ESYT3A0FGR9 886 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 F8W810 466 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 DPYSL4O14531 572 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 SASH3O75995 380 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 BEST1O76090 585 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 KRT1P04264 644 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 KRT7P08729 469 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 LCP1P13796 627 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PCK1P35558 622 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 SCNN1AP37088 669 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 DR1Q01658 176 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 TLE2Q04725 743 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 TRADDQ15628 312 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 MFSD7Q6UXD7 560 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 SLC26A9Q7LBE3 791 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PIGZQ86VD9 579 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 GSPT2Q8IYD1 628 aaKnown RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 C12orf50Q8NA57 414 aaPredicted RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 AENQ8WTP8 325 aaKnown RBP12.87□□□□□ -0.35
TMCO1-202ENST00000392129 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 RAPGEF5Q92565 580 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 SCLYQ96I15 445 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 ZNF333Q96JL9 665 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 HEMGNQ9BXL5 484 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 TBC1D13Q9NVG8 400 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 PCDHB7Q9Y5E2 793 aa12.87□□□□□ -0.35
TMCO1-202ENST00000392129 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 CXCL10P02778 98 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 MIPP30301 263 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
TMCO1-202ENST00000392129 CCL23P55773 120 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 COPS2P61201 443 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
TMCO1-202ENST00000392129 CCDC14Q49A88 953 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 ODF2Q5BJF6 829 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 CCDC137Q6PK04 289 aaKnown RBP12.86□□□□□ -0.35
TMCO1-202ENST00000392129 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 ARCQ7LC44 396 aa12.86□□□□□ -0.35
TMCO1-202ENST00000392129 HDXQ7Z353 690 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms