RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PAPSS1O43252 624 aaPredicted RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 GABBR2O75899 941 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 KRT1P04264 644 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 TKTP29401 623 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 PCK1P35558 622 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 SMC1AQ14683 1233 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 ATP13A4Q4VNC1 1196 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 TXNRD3NBQ6F5E7 133 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 JAMLQ86YT9 394 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 KRT222Q8N1A0 295 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 PIWIL1Q96J94 861 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 CNPY3Q9BT09 278 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 HOMER3Q9NSC5 361 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 INPP5FQ9Y2H2 1132 aa12.03□□□□□ -0.48
SMARCAL1-203ENST00000392128 ATP2C2O75185 946 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 RNF8O76064 485 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ODC1P11926 461 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ECHS1P30084 290 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 PLCB3Q01970 1234 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 TRADDQ15628 312 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 DUPD1Q68J44 220 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 TRNP1Q6NT89 227 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ARCQ7LC44 396 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ANKS1BQ7Z6G8 1248 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 RXFP2Q8WXD0 754 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 DEFB118Q96PH6 123 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 ERP44Q9BS26 406 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.48
SMARCAL1-203ENST00000392128 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 M0QZQ0 153 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 PITPNM1O00562 1244 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 B3GAT3O94766 335 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 CYP11A1P05108 521 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 COL6A1P12109 1028 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 PDGFRAP16234 1089 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 FLT3P36888 993 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 DRG2P55039 364 aaKnown RBP12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 SLC8A3P57103 927 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 LLGL1Q15334 1064 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 ODF2Q5BJF6 829 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 MFSD7Q6UXD7 560 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 CD300LGQ6UXG3 332 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 SPOCD1Q6ZMY3 1216 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 PAQR9Q6ZVX9 377 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 SND1Q7KZF4 910 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 SCUBE3Q8IX30 993 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 SYT15Q9BQS2 421 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 UBXN6Q9BZV1 441 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 DCLK3Q9C098 648 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 CRTAC1Q9NQ79 661 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 KLHL11Q9NVR0 708 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 DSEQ9UL01 958 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 CDH9Q9ULB4 789 aa12.02□□□□□ -0.49
SMARCAL1-203ENST00000392128 NPR3P17342 541 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 IBSPP21815 317 aaPredicted RBP12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 IL1R2P27930 398 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 PCSK1P29120 753 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 MIPP30301 263 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 CDKN2BP42772 138 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 MTFR1Q15390 333 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 TFDP3Q5H9I0 405 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 MDH1BQ5I0G3 518 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 ZFYVE27Q5T4F4 411 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 C1orf54Q8WWF1 131 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 KCTD13Q8WZ19 329 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 RAPGEF5Q92565 580 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 GDAP1L1Q96MZ0 367 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 HEMGNQ9BXL5 484 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 HPCAL4Q9UM19 191 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 EFR3BQ9Y2G0 817 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 hCG_1818297A0A087WSY0 165 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 ARHGEF37A1IGU5 675 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 C3orf70A6NLC5 250 aaPredicted RBP12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 PI4K2BG5E9Z4 385 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 DAPK3O43293 454 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 NBNO60934 754 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 TJP3O95049 919 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 CCL5P13501 91 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 HLTFQ14527 1009 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 CCNG2Q16589 344 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 CLLU1OSQ5K130 101 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
SMARCAL1-203ENST00000392128 DDX42Q86XP3 938 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms