RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PDZD8Q8NEN9 1154 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 ST13P5Q8NFI4 369 aaPredicted RBP13.46□□□□□ -0.26
GGPS1-203ENST00000391855 SEMA4DQ92854 862 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 TBC1D17Q9HA65 648 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.26
GGPS1-203ENST00000391855 OBSL1O75147 1896 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF318Q5VUA4 2279 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 NCANO14594 1321 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 TADA3O75528 432 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 NPR3P17342 541 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 CD58P19256 250 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 GDI1P31150 447 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 VCPP55072 806 aaKnown RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 MLLT6P55198 1093 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 STX17P56962 302 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 GRM2Q14416 872 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 SLC44A4Q53GD3 710 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 TRIM59Q8IWR1 403 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 BPIFB1Q8TDL5 484 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 OVCA2Q8WZ82 227 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 DDX23Q9BUQ8 820 aaKnown RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 OSBPL6Q9BZF3 934 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 KRT82Q9NSB4 513 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 THG1LQ9NWX6 298 aaKnown RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 HMGXB4Q9UGU5 601 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 MRPS17Q9Y2R5 130 aaKnown RBP13.45□□□□□ -0.26
GGPS1-203ENST00000391855 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
GGPS1-203ENST00000391855 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CLDN5O00501 218 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 STK25O00506 426 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 MAN2B1O00754 1011 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 AP1G2O75843 785 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 PRAMEF12O95522 483 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 FAM200BP0CF97 657 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 GLULP15104 373 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 MAGEA9P43362 315 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CUL2Q13617 745 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
GGPS1-203ENST00000391855 PAQR9Q6ZVX9 377 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 TMEM105Q8N8V8 129 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 MAB21L3Q8N8X9 362 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 STKLD1Q8NE28 680 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 TWNKQ96RR1 684 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 NELL2Q99435 816 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CSNK1G1Q9HCP0 422 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.26
GGPS1-203ENST00000391855 CISHQ9NSE2 258 aa13.44□□□□□ -0.26
GGPS1-203ENST00000391855 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.44□□□□□ -0.26
GGPS1-203ENST00000391855 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 KANSL1LA0AUZ9 987 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 MBD3O95983 291 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 AFPP02771 609 aaKnown RBP13.43□□□□□ -0.26
GGPS1-203ENST00000391855 CKMP06732 381 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 CCDC130P13994 396 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TCF3P15923 654 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 YWHAQP27348 245 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 PTPN5P54829 565 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TXNDC8Q6A555 127 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 RSPRY1Q96DX4 576 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TMEM176AQ96HP8 235 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 NT5C1BQ96P26 610 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 FBXO44Q9H4M3 255 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TRPC7Q9HCX4 862 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TDP1Q9NUW8 608 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 TMEM30AQ9NV96 361 aa13.43□□□□□ -0.26
GGPS1-203ENST00000391855 COL4A2P08572 1712 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 KIF26AQ9ULI4 1882 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ARNTLO00327 626 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 NCAM2O15394 837 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ERCC5P28715 1186 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-203ENST00000391855 SLC5A3P53794 718 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 USP46P62068 366 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 TAF10Q12962 218 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ORC1Q13415 861 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 TPD52L1Q16890 204 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ARHGAP17Q68EM7 881 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF852Q6ZMS4 543 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 TPRG1Q6ZUI0 275 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 KIAA1958Q8N8K9 716 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 PJA1Q8NG27 643 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 USP13Q92995 863 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms