RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CACNB3P54284 484 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 CORO1CQ9ULV4 474 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 RGS2P41220 211 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 AP3M2P53677 418 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 XRCC4Q13426 336 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 QRICH1Q2TAL8 776 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF57Q68EA5 555 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 UXS1Q8NBZ7 420 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 APOL5Q9BWW9 433 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 MMADHCQ9H3L0 296 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 RSAD1Q9HA92 442 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 LRRC71Q8N4P6 559 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 SLC7A5P2Q9GIP4 190 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 RAD17O75943 681 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 KCNJ2P63252 427 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 PPP1R14BQ96C90 147 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 SEPHS2Q99611 448 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 CTNNAL1Q9UBT7 734 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ADAM30Q9UKF2 790 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 MAGI3Q5TCQ9 1506 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ATP10AO60312 1499 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 HEATR9A2RTY3 570 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RAD23AP54725 363 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 NRF1Q16656 503 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RTL3Q8N8U3 475 aaKnown RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 YIPF2Q9BWQ6 316 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 MAP2K7O14733 419 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 GTF2H1P32780 548 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 IL6STP40189 918 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 PGS1Q32NB8 556 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ACCSLQ4AC99 568 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RNF19BQ6ZMZ0 732 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 CHSY1Q86X52 802 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 UBA3Q8TBC4 463 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 KLHL3Q9UH77 587 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ITGB1BP2Q9UKP3 347 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 MYL3P08590 195 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 GPD1P21695 349 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 DGKKQ5KSL6 1271 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 POU5F2Q8N7G0 328 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 ENKURQ8TC29 256 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 KRT35Q92764 455 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 SELENONQ9NZV5 590 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 SFNP31947 248 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 CCT3P49368 545 aaKnown RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 CCNHP51946 323 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 SCARF1Q14162 830 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 AKIRIN2Q53H80 203 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
SHANK1-204ENST00000391814 KYQ8NBH2 561 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 LACRTQ9GZZ8 138 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 RNPEPL1Q9HAU8 725 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 FEM1BQ9UK73 627 aa16.72■□□□□ 0.27
SHANK1-204ENST00000391814 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
SHANK1-204ENST00000391814 IDH3BO43837 385 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 APOA4P06727 396 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 GJA8P48165 433 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 CENPAP49450 140 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 CYP51A1Q16850 503 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 PERM1Q5SV97 790 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 ATP8B4Q8TF62 1192 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 TFB1MQ8WVM0 346 aaKnown RBP16.71■□□□□ 0.27
SHANK1-204ENST00000391814 KCTD10Q9H3F6 313 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 AGRPO00253 132 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 NUP62P37198 522 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-204ENST00000391814 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 DGCR6LQ9BY27 220 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 BTN3A3O00478 584 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 PGM3O95394 542 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF682O95780 498 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 FASP25445 335 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 HLFQ16534 295 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 ATG14Q6ZNE5 492 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 ENTPD7Q9NQZ7 604 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 RAD51BO15315 384 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 KRT6BP04259 564 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 KRT6CP48668 564 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 HSD17B4P51659 736 aa16.71■□□□□ 0.27
SHANK1-204ENST00000391814 NCOA4Q13772 614 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms