RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 APPL2Q8NEU8 664 aa19.1■□□□□ 0.65
ACTN4-202ENST00000390009 AAASQ9NRG9 546 aa19.1■□□□□ 0.65
ACTN4-202ENST00000390009 ST3GAL5Q9UNP4 418 aa19.1■□□□□ 0.65
ACTN4-202ENST00000390009 ZNF148Q9UQR1 794 aa19.1■□□□□ 0.65
ACTN4-202ENST00000390009 TRUB2O95900 331 aaKnown RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CTSHP09668 335 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 ATP1A2P50993 1020 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 TAZQ16635 292 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 UBAP2Q5T6F2 1119 aaKnown RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 SH3PXD2AQ5TCZ1 1133 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 AGBL2Q5U5Z8 902 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 EMC10Q5UCC4 262 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 OLFML1Q6UWY5 402 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 PRUNE1Q86TP1 453 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CRYBG2Q8N1P7 616 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 ZFP42Q96MM3 310 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 SNX25Q9H3E2 840 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 BCCIPQ9P287 314 aaKnown RBP eCLIP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 ANAPC5Q9UJX4 755 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 RIPK2O43353 540 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CD48P09326 243 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CCDC130P13994 396 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CHKAP35790 457 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 VCPP55072 806 aaKnown RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 LILRA4P59901 499 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CACNB2Q08289 660 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 TAF5Q15542 800 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 OASLQ15646 514 aaKnown RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 C15orf59Q2T9L4 293 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 LIMS2Q7Z4I7 341 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 ALLCQ8N6M5 410 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 KCTD6Q8NC69 237 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 BBOF1Q8ND07 529 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 CMASQ8NFW8 434 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 HSPH1Q92598 858 aa19.09■□□□□ 0.65
ACTN4-202ENST00000390009 DRG1Q9Y295 367 aaKnown RBP19.09■□□□□ 0.65
ACTN4-202ENST00000390009 ADAMTS4O75173 837 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 CHRNA1P02708 482 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 DYNLT1P63172 113 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 NKX3-2P78367 333 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 SLC6A3Q01959 620 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 CYP4F22Q6NT55 531 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 HOOK3Q86VS8 718 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 SCUBE3Q8IX30 993 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 CCHCR1Q8TD31 782 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 NKD2Q969F2 451 aaPredicted RBP19.08■□□□□ 0.64
ACTN4-202ENST00000390009 HHIPL1Q96JK4 782 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 PPP1R10Q96QC0 940 aaKnown RBP19.08■□□□□ 0.64
ACTN4-202ENST00000390009 PEBP4Q96S96 227 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 SENP6Q9GZR1 1112 aaPredicted RBP19.08■□□□□ 0.64
ACTN4-202ENST00000390009 TSPYL1Q9H0U9 437 aa19.08■□□□□ 0.64
ACTN4-202ENST00000390009 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 MEIS3P2A8K0S8 358 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 PAPSS1O43252 624 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CST8O60676 142 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 HUS1O60921 280 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 GABBR2O75899 941 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 ALDH1A1P00352 501 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 ADORA2BP29275 332 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 LRPAP1P30533 357 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 SNX16P57768 344 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 BST2Q10589 180 aaKnown RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CDO1Q16878 200 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 IZUMO3Q5VZ72 239 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 BBS12Q6ZW61 710 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 TRMT10CQ7L0Y3 403 aaKnown RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 ADGRF2Q8IZF7 708 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 ANKRD52Q8NB46 1076 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 GLIS1Q8NBF1 620 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CFAP57Q96MR6 1250 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CDC42EP4Q9H3Q1 356 aaKnown RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 XPNPEP3Q9NQH7 507 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 FAM105AQ9NUU6 356 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 ITGAVP06756 1048 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 IRAK1P51617 712 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 BCAT1P54687 386 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 GNGT1P63211 74 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 P3H1Q32P28 736 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CCDC14Q49A88 953 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 RAB6CQ53S08 254 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 CYP4V2Q6ZWL3 525 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 SLC35B2Q8TB61 432 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 KHSRPQ92945 711 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 B3GNT5Q9BYG0 378 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 RAB6CQ9H0N0 254 aa19.07■□□□□ 0.64
ACTN4-202ENST00000390009 SAE1Q9UBE0 346 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 NOVA2Q9UNW9 492 aaKnown RBP19.07■□□□□ 0.64
ACTN4-202ENST00000390009 TMEM88BA6NKF7 163 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 DPYSL4O14531 572 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ASGR1P07306 291 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 HPDP32754 393 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 CAP1Q01518 475 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 OTUD4Q01804 1114 aaKnown RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 PLCB3Q01970 1234 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 SKIDA1Q1XH10 827 aa19.06■□□□□ 0.64
ACTN4-202ENST00000390009 TTC19Q6DKK2 380 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-202ENST00000390009 ZDHHC17Q8IUH5 632 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms