RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 ZNF200P98182 395 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 PPM1LQ5SGD2 360 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 ZBTB45Q96K62 511 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 PGLYRP2Q96PD5 576 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 FTHL17Q9BXU8 183 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 CELF4Q9BZC1 486 aaKnown RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 CIPCQ9C0C6 399 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 XAB2Q9HCS7 855 aaKnown RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 MSRAQ9UJ68 235 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 VPS9D1Q9Y2B5 631 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 HMGCRP04035 888 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 GJC2Q5T442 439 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 GBP7Q8N8V2 638 aaPredicted RBP10.69□□□□□ -0.7
PKP4-201ENST00000389757 RXFP2Q8WXD0 754 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 CAPNS2Q96L46 248 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 TRABDQ9H4I3 376 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 RRN3Q9NYV6 651 aa10.69□□□□□ -0.7
PKP4-201ENST00000389757 COL14A1Q05707 1796 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 USP2O75604 605 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 CLNS1AP54105 237 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 ANKS3Q6ZW76 656 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 PPIL6Q8IXY8 311 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 ZNF669Q96BR6 464 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 ATXN3LQ9H3M9 355 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 PPCSQ9HAB8 311 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 UXTQ9UBK9 157 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 PRR23AA6NEV1 266 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 C2orf81A6NN90 581 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 MAFO75444 373 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 RTN3O95197 1032 aaPredicted RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 SERPIND1P05546 499 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 YWHAQP27348 245 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CCR1P32246 355 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 KCNJ1P48048 391 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CCL23P55773 120 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 GCNT1Q02742 428 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 MTA1Q13330 715 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 TMEM86AQ8N2M4 240 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 ATP6V1G3Q96LB4 118 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 DEFB118Q96PH6 123 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 RBM12Q9NTZ6 932 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 PLA2G4CQ9UP65 541 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 SNCAIPQ9Y6H5 919 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 SIGLEC1Q9BZZ2 1709 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 OPHN1O60890 802 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CDH16O75309 829 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 SLC8A1P32418 973 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CLEC16AQ2KHT3 1053 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 COBLL1Q53SF7 1204 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 SPRYD7Q5W111 196 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 C1orf186Q6ZWK4 172 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 TGS1Q96RS0 853 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 GPATCH2LQ9NWQ4 482 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 AAR2Q9Y312 384 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 SYNCRIPO60506 623 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 GLRA2P23416 452 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 SCNN1GP51170 649 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 ARMC6Q6NXE6 501 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 MTMR14Q8NCE2 650 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
PKP4-201ENST00000389757 SPATA17Q96L03 361 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CLCA2Q9UQC9 943 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 TNFSF13BQ9Y275 285 aa10.68□□□□□ -0.7
PKP4-201ENST00000389757 CHRM3P20309 590 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 COILP38432 576 aaPredicted RBP10.67□□□□□ -0.7
PKP4-201ENST00000389757 ARFIP2P53365 341 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 RHOAP61586 193 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 TRADDQ15628 312 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 CDKAL1Q5VV42 579 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 BLOC1S5Q8TDH9 187 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 SLC20A1Q8WUM9 679 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 PSMC3IPQ9P2W1 217 aaPredicted RBP10.67□□□□□ -0.7
PKP4-201ENST00000389757 DCTN4Q9UJW0 460 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 USP18Q9UMW8 372 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 MLH1P40692 756 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
PKP4-201ENST00000389757 ADIGQ0VDE8 80 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 TFDP3Q5H9I0 405 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 TRIM68Q6AZZ1 485 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 ZDHHC17Q8IUH5 632 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 KIRREL3Q8IZU9 778 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 EMC1Q8N766 993 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 COG1Q8WTW3 980 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 ZNF606Q8WXB4 792 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 ARHGAP10A1A4S6 786 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 GOLGA8RI6L899 631 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 PAEPP09466 180 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 FNTAP49354 379 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 ITGA8P53708 1063 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 TBX4P57082 545 aa10.67□□□□□ -0.7
PKP4-201ENST00000389757 EFTUD2Q15029 972 aaKnown RBP eCLIP10.67□□□□□ -0.73e-7■■□□□ 13.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms