RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 A0A1W2PPI3 338 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 BTBD19C9JJ37 291 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 AQP7O14520 342 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 NRP2O60462 931 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 SORBS2O94875 1100 aaKnown RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ALOX5P09917 674 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 KRTAP2-3P0C7H8 128 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ALOX15P16050 662 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 CANXP27824 592 aaKnown RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 DRD3P35462 400 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ADPRHP54922 357 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 CASP7P55210 303 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 SEPT7Q16181 437 aaKnown RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 C9orf139Q6ZV77 190 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ANKS3Q6ZW76 656 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 TMC4Q7Z404 712 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 LRRTM1Q86UE6 522 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 NME9Q86XW9 330 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZNF440Q8IYI8 595 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 FAM9AQ8IZU1 332 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ADAD2Q8NCV1 583 aaKnown RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 LPAR1Q92633 364 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 MYL10Q9BUA6 226 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 KRTAP2-4Q9BYR9 128 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 CIPCQ9C0C6 399 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 AMBRA1Q9C0C7 1298 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 BCL11AQ9H165 835 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 PDZD7Q9H5P4 517 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 TMEM45AQ9NWC5 275 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 VSX1Q9NZR4 365 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 MSRB1Q9NZV6 116 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 AGAP1Q9UPQ3 857 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 CDYLQ9Y232 598 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 ATRNL1Q5VV63 1379 aa-0.08□□□□□ -2.42
RNU6-540P-201ENST00000384622 DOPEY1Q5JWR5 2465 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 COL6A3P12111 3177 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 CCDC195A0A1B0GUA6 201 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 OR6C75A6NL08 312 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 ARVCFO00192 962 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 AGRPO00253 132 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 TLX3O43711 291 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 FGF5P12034 268 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 IRX1P78414 480 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 HSF1Q00613 529 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 ROR2Q01974 943 aaKnown RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 GUCY1A3Q02108 690 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 SP140Q13342 867 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 ZCCHC8Q6NZY4 707 aaKnown RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 GDPD4Q6W3E5 623 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 HS2ST1Q7LGA3 356 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 NSUN7Q8NE18 718 aaKnown RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 ABHD11Q8NFV4 315 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 CADM4Q8NFZ8 388 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 RP9Q8TA86 221 aaKnown RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 FGFBP3Q8TAT2 258 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 DEPTORQ8TB45 409 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 GAB3Q8WWW8 586 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 TLR10Q9BXR5 811 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 SPRR2GQ9BYE4 73 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 KRTAP2-1Q9BYU5 128 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 POFUT1Q9H488 388 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 RBM12Q9NTZ6 932 aaKnown RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 MOCS1Q9NZB8 636 aa-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 CCNL1Q9UK58 526 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-540P-201ENST00000384622 A0A1W2PPC1 479 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAM172BPA6NC97 362 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 J3KR12 359 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 PRODHO43272 600 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 SORBS3O60504 671 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 GLUD1P00367 558 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 IGKV3-11P04433 115 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 PDHA1P08559 390 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 IL6RP08887 468 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 CPA1P15085 419 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF32P17041 273 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 LIPAP38571 399 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 GLUD2P49448 558 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 SCNN1BP51168 640 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIF11P52732 1056 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRTAP12-3P60328 96 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 Q0VFX4 171 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 PPIGQ13427 754 aaKnown RBP eCLIP-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 BOP1Q14137 746 aaKnown RBP-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 SEC23BQ15437 767 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 TCTEX1D4Q5JR98 221 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 TREML2Q5T2D2 321 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 L1TD1Q5T7N2 865 aaKnown RBP-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 FOXB2Q5VYV0 432 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 PHYKPLQ8IUZ5 450 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 GLB1L2Q8IW92 636 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 C7orf31Q8N865 590 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 SPATA20Q8TB22 786 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZPLD1Q8TCW7 415 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF480Q8WV37 535 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 WDR24Q96S15 920 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 LITAFQ99732 161 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 SCNM1Q9BWG6 230 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 DCLK3Q9C098 648 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 TNMDQ9H2S6 317 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms