RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 PSMC1P62191 440 aaKnown RBP19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 NOP14P78316 857 aaKnown RBP19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 AMPD3Q01432 767 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 PSMD2Q13200 908 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 CCDC6Q16204 474 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 TRAPPC11Q7Z392 1133 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 PDILTQ8N807 584 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 TTC16Q8NEE8 873 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 MYCBPAPQ8TBZ2 947 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 LINC00597Q9H2U6 94 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 RXFP3Q9NSD7 469 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 KBTBD4Q9NVX7 518 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 POLR3BQ9NW08 1133 aaPredicted RBP19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 MTMR6Q9Y217 621 aa19.1■□□□□ 0.65
RPUSD3-201ENST00000383820 TACC1O75410 805 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 SLC7A9P82251 487 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 CYP27A1Q02318 531 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 CNNM4Q6P4Q7 775 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 GLIS3Q8NEA6 775 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 ZNF507Q8TCN5 953 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 PCED1BQ96HM7 432 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 C8orf48Q96LL4 319 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 MMS19Q96T76 1030 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 TRIM9Q9C026 710 aa19.09■□□□□ 0.65
RPUSD3-201ENST00000383820 ZNF840PA6NDX5 716 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 LEFTY2O00292 366 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 SLC9A3R1O14745 358 aaPredicted RBP19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 KRT37O76014 449 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 OLFM2O95897 454 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 PDGFRBP09619 1106 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 PMLP29590 882 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 HOXD13P35453 343 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 GNL1P36915 607 aaPredicted RBP19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 OPRD1P41143 372 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 USP46P62068 366 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 SNRPFP62306 86 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 STK38Q15208 465 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 E2F4Q16254 413 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 ST3GAL2Q16842 350 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 EPM2AIP1Q7L775 607 aaPredicted RBP19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 LINC00301Q8NCQ3 95 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 TSTD1Q8NFU3 115 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 USP33Q8TEY7 942 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 LSM14BQ9BX40 385 aaKnown RBP19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 SNX25Q9H3E2 840 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 ANGPTL2Q9UKU9 493 aa19.08■□□□□ 0.64
RPUSD3-201ENST00000383820 UBE4BO95155 1302 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 BCLAF3A2AJT9 711 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 PPP6R2O75170 966 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 STAU1O95793 577 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 KCNA4P22459 653 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 DGKEP52429 567 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 SHC2P98077 582 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 ZXDBP98169 803 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 PSMD6Q15008 389 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 SNRNP35Q16560 246 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 USP39Q53GS9 565 aaKnown RBP19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 N4BP2L1Q5TBK1 243 aaPredicted RBP19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 RASSF3Q86WH2 238 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 FNBP1Q96RU3 617 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 CGRRF1Q99675 332 aa19.07■□□□□ 0.64
RPUSD3-201ENST00000383820 CNOT1A5YKK6 2376 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 F8VP50 259 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 K7EQS6 105 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 CAVIN2O95810 425 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 CST3P01034 146 aaPredicted RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 TNNI1P19237 187 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 EIF2DP41214 584 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 ASIC1P78348 528 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 MRPS21P82921 87 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 GAB4Q2WGN9 574 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 MDH1BQ5I0G3 518 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 FAM26FQ5R3K3 315 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 TDRD10Q5VZ19 366 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 RNF43Q68DV7 783 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 DDX42Q86XP3 938 aaKnown RBP eCLIP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 ADGRG2Q8IZP9 1017 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 OR6B3Q8NGW1 331 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 HPS3Q969F9 1004 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 CHAMP1Q96JM3 812 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 CNOT6LQ96LI5 555 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 SLITRK1Q96PX8 696 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 MRPL45Q9BRJ2 306 aaKnown RBP19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 ELOVL4Q9GZR5 314 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 SMOC1Q9H4F8 434 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 AGPAT3Q9NRZ7 376 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 MMP17Q9ULZ9 603 aa19.06■□□□□ 0.64
RPUSD3-201ENST00000383820 DCLK1O15075 740 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 SPTLC2O15270 562 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 TGFB1I1O43294 461 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 STX6O43752 255 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 OAS1P00973 400 aaKnown RBP19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 CYP17A1P05093 508 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 DLATP10515 647 aaKnown RBP19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 PTPN1P18031 435 aaKnown RBP19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 GBP1P32455 592 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 TNNC1P63316 161 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 CREB5Q02930 508 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 CYP24A1Q07973 514 aa19.05■□□□□ 0.64
RPUSD3-201ENST00000383820 WDR72Q3MJ13 1102 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms