RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 KCNQ4P56696 695 aa12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 NFX1Q12986 1120 aaKnown RBP12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 RTKN2Q8IZC4 609 aa12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 SPAG16Q8N0X2 631 aa12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 UTP15Q8TED0 518 aaKnown RBP12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 MAST1Q9Y2H9 1570 aa12.78□□□□□ -0.36
SMARCA2-209ENST00000382203 MDM4O15151 490 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 PLOD3O60568 738 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 HNMTP50135 292 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 TTC39CQ8N584 583 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 OR7A2PQ8NGA2 310 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 GRPEL2Q8TAA5 225 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 MYCBPAPQ8TBZ2 947 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 DCUN1D1Q96GG9 259 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 CLDN3O15551 220 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 SLC26A4O43511 780 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 TLR2O60603 784 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 THEGLP0DJG4 465 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 MSH3P20585 1137 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 GUCA1AP43080 201 aaPredicted RBP12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 ZNF846Q147U1 533 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 PACS1Q6VY07 963 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 EFL1Q7Z2Z2 1120 aaKnown RBP12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 SENP7Q9BQF6 1050 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 FBXO40Q9UH90 709 aa12.77□□□□□ -0.36
SMARCA2-209ENST00000382203 ARHGEF12Q9NZN5 1544 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 TRPC5OSA6NMA1 111 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ATP9BO43861 1147 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 SERPIND1P05546 499 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 CEBPGP53567 150 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 BCAR1P56945 870 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 TYSND1Q2T9J0 566 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 MGAT4AQ9UM21 535 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ABCG2Q9UNQ0 655 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 C9IYK1 514 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 PPM1BO75688 479 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 FARP2O94887 1054 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 POLR2EP19388 210 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 GSSP48637 474 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ARL4DP49703 201 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 GJA9P57773 515 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 MAPK6Q16659 721 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ROPN1BQ9BZX4 212 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ROPN1Q9HAT0 212 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 FEM1BQ9UK73 627 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 PNMA8BQ9ULN7 279 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 USP27XA6NNY8 438 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 IFNA14P01570 189 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ATP1A1P05023 1023 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 TSPAN19P0C672 248 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 CALB2P22676 271 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 HOXD10P28358 340 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 EEF1AKMT1Q8WVE0 214 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 TSPAN17Q96FV3 270 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ART5Q96L15 291 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
SMARCA2-209ENST00000382203 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 SDC4P31431 198 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 ARL3P36405 182 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 GPR1P46091 355 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 NT5C2P49902 561 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 SIK1P57059 783 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 USP10Q14694 798 aaKnown RBP12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 KYAT1Q16773 422 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 ZCCHC8Q6NZY4 707 aaKnown RBP12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 SETD9Q8NE22 299 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.377e-7■■■■□ 25
SMARCA2-209ENST00000382203 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 METTL21EPA6NDL7 271 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 ATP6V1C1P21283 382 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 HOXA13P31271 388 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 PPP3CCP48454 512 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 FNTAP49354 379 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 MIGA2Q7L4E1 593 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-209ENST00000382203 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms