RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 KLHL12Q53G59 568 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CYP4A22Q5TCH4 519 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZCCHC8Q6NZY4 707 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 MTSS1LQ765P7 747 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FRMD5Q7Z6J6 570 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 CLYBLQ8N0X4 340 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MED8Q96G25 268 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MIEF1Q9NQG6 463 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 METTL5Q9NRN9 209 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 KIAA0232Q92628 1395 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TRAPPC8Q9Y2L5 1435 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 A2MP01023 1474 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 PVALEFA0A1B0GWK0 134 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 LRG1P02750 347 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 UMPSP11172 480 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 JAK1P23458 1154 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 GLRBP48167 497 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 BCAP31P51572 246 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ITGA8P53708 1063 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 POLD3Q15054 466 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 MIIPQ5JXC2 388 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ALKBH2Q6NS38 261 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FAM228AQ86W67 206 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 HPS3Q969F9 1004 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KCTD14Q9BQ13 255 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TMEM47Q9BQJ4 181 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FOXP3Q9BZS1 431 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ABI2Q9NYB9 513 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 PDP2Q9P2J9 529 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SMAPO00193 183 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SPTLC1O15269 473 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ATMINO43313 823 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TBC1D12O60347 775 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 OR6B1O95007 311 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ATG7O95352 703 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZNF24P17028 368 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 VCLP18206 1134 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 LIFRP42702 1097 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 NEDD4P46934 1319 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 STARD3Q14849 445 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MTF1Q14872 753 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KBTBD12Q3ZCT8 623 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TIGD7Q6NT04 549 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 RBBP8NLQ8NC74 664 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZNF671Q8TAW3 534 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ACSF2Q96CM8 615 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TMEM79Q9BSE2 394 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KIAA0586Q9BVV6 1533 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 MTIF3Q9H2K0 278 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 ACAD9Q9H845 621 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 JPH1Q9HDC5 661 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 ITSN2Q9NZM3 1697 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 AP3D1O14617 1153 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TNFRSF21O75509 655 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 STAU1O95793 577 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 TXNP10599 105 aaKnown RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 EFNA5P52803 228 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 GRIK3Q13003 919 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ORC2Q13416 577 aaPredicted RBP6.07□□□□□ -1.44
RFX3-204ENST00000382004 ATP6AP1LQ52LC2 224 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 TCEAL5Q5H9L2 206 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FAXCQ5TGI0 409 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 KIAA0408Q6ZU52 694 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 CCDC33Q8N5R6 958 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 FAM111AQ96PZ2 611 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SENP2Q9HC62 589 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 GPR108Q9NPR9 543 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SMARCAL1Q9NZC9 954 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 SNX12Q9UMY4 172 aa6.07□□□□□ -1.44
RFX3-204ENST00000382004 ZBTB22O15209 634 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 BCL10O95999 233 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 ITGA4P13612 1032 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 STIP1P31948 543 aaKnown RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 ULK3Q6PHR2 472 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 SLC13A5Q86YT5 568 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 SUGP1Q8IWZ8 645 aaKnown RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 IPCEF1Q8WWN9 437 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 CHST12Q9NRB3 414 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 SLAIN2Q9P270 581 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 HEY2Q9UBP5 337 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 SRP68Q9UHB9 627 aaKnown RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 HAO1Q9UJM8 370 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 ACADSP16219 412 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 HNMTP50135 292 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 ZNF177Q13360 481 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 CRYMQ14894 314 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 CCSAPQ6IQ19 270 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 TMEM26Q6ZUK4 368 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 SLC44A5Q8NCS7 719 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 GPRC5DQ9NZD1 345 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 WDR35Q9P2L0 1181 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 STAP2Q9UGK3 403 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 NUP160Q12769 1436 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 ZNF335Q9H4Z2 1342 aaPredicted RBP6.06□□□□□ -1.44
RFX3-204ENST00000382004 IDH3BO43837 385 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 PDE9AO76083 593 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 TDP2O95551 362 aa6.06□□□□□ -1.44
RFX3-204ENST00000382004 FGFR1P11362 822 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms