RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 SLC24A2Q9UI40 661 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 PSTPIP1O43586 416 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 VNN1O95497 513 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 TROVE2P10155 538 aaKnown RBP eCLIP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 RRM1P23921 792 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 RAB27AP51159 221 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 HUNKP57058 714 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 POU5F1BQ06416 359 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 SURF1Q15526 300 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 DUSP28Q4G0W2 176 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 MTHFD1LQ6UB35 978 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 TSHZ1Q6ZSZ6 1077 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 FETUBQ9UGM5 382 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
GPNMB-202ENST00000381990 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
GPNMB-202ENST00000381990 FOXO6A8MYZ6 492 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 INO80B-WBP1J3KQ70 363 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 GJB1P08034 283 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 PDHA1P08559 390 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 GNAT1P11488 350 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 HOXD8P13378 290 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 KRT5P13647 590 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 PROZP22891 400 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SP100P23497 879 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 IGBP1P78318 339 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 CCDC6Q16204 474 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 TAF1BQ53T94 588 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF449Q6P9G9 518 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ILDR2Q71H61 639 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 CLNKQ7Z7G1 428 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 LINC01465Q8N7H1 131 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ATG4AQ8WYN0 398 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 DHX38Q92620 1227 aaKnown RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 C9orf72Q96LT7 481 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 TRPM7Q96QT4 1865 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 C16orf70Q9BSU1 422 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 FAM192AQ9GZU8 254 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 NMRK1Q9NWW6 199 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 CHORDC1Q9UHD1 332 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ENTPD5O75356 428 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF286BP0CG31 522 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SMPD1P17405 629 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 KRT15P19012 456 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 CA4P22748 312 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 TNFSF9P41273 254 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 PHKA2P46019 1235 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 BPIFB4P59827 614 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 MBTD1Q05BQ5 628 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ATF7IP2Q5U623 682 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 NLRP9Q7RTR0 991 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 OR5B17Q8NGF7 314 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 DDX1Q92499 740 aaKnown RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ELMO3Q96BJ8 720 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 BTBD10Q9BSF8 475 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 PTPRHQ9HD43 1115 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SLCO1B3Q9NPD5 702 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ACP6Q9NPH0 428 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 DNAJC17Q9NVM6 304 aaKnown RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 WDR35Q9P2L0 1181 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 CPSF3Q9UKF6 684 aaKnown RBP9.37□□□□□ -0.91
GPNMB-202ENST00000381990 ZSWIM8A7E2V4 1837 aa9.37□□□□□ -0.91
GPNMB-202ENST00000381990 SIGLEC16A6NMB1 481 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 H3BRB1 525 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TYROBPO43914 113 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CBX6O95503 412 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TBXAS1P24557 533 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 KLRC2P26717 231 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 GCAP28676 217 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CUL2Q13617 745 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 NCOA4Q13772 614 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TRIP13Q15645 432 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 GSTA3Q16772 222 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 FAM187BQ17R55 369 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CLEC16AQ2KHT3 1053 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 HHATQ5VTY9 493 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CCDC28BQ9BUN5 200 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TUT1Q9H6E5 874 aaKnown RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 NMRK2Q9NPI5 230 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 PRMT7Q9NVM4 692 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-202ENST00000381990 CPA4Q9UI42 421 aa9.36□□□□□ -0.91
GPNMB-202ENST00000381990 TNFSF13BQ9Y275 285 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms