RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
SGCB-201ENST00000381431 DCCP43146 1447 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 ASTN1O14525 1302 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 ANGPT2O15123 496 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 NFIL3Q16649 462 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 TEDDM1Q5T9Z0 273 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 RNF217Q8TC41 542 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 ZNF518BQ9C0D4 1074 aa17.82■□□□□ 0.44
SGCB-201ENST00000381431 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
SGCB-201ENST00000381431 ETFBP38117 255 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 DGKDQ16760 1214 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 SHROOM1Q2M3G4 852 aaPredicted RBP17.81■□□□□ 0.44
SGCB-201ENST00000381431 SZRD1Q7Z422 152 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 MRPL1Q9BYD6 325 aaKnown RBP17.81■□□□□ 0.44
SGCB-201ENST00000381431 FRMD8Q9BZ67 464 aaPredicted RBP17.81■□□□□ 0.44
SGCB-201ENST00000381431 KIAA1683Q9H0B3 1180 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 F8VP50 259 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 PSMD10O75832 226 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 LNX1Q8TBB1 728 aaPredicted RBP17.81■□□□□ 0.44
SGCB-201ENST00000381431 SNX19Q92543 992 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 TMEM176AQ96HP8 235 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 IL1RL2Q9HB29 575 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 SAE1Q9UBE0 346 aaPredicted RBP17.81■□□□□ 0.44
SGCB-201ENST00000381431 BGNP21810 368 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 ELK3P41970 407 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 GLRBP48167 497 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 MAPRE2Q15555 327 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 MFSD14CQ5VZR4 134 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 WDR49Q8IV35 697 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 CTNNAL1Q9UBT7 734 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 PRDM4Q9UKN5 801 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 CDY2AQ9Y6F7 541 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 CDY1Q9Y6F8 540 aa17.81■□□□□ 0.44
SGCB-201ENST00000381431 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 RNF219Q5W0B1 726 aaPredicted RBP17.8■□□□□ 0.44
SGCB-201ENST00000381431 BATF3Q9NR55 127 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 NINJ2Q9NZG7 142 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 TADA2AO75478 443 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 PDAP1Q13442 181 aaKnown RBP17.8■□□□□ 0.44
SGCB-201ENST00000381431 GCNAQ96QF7 691 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 SYCE1LA8MT33 242 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 AP1G2O75843 785 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 ARHGEF6Q15052 776 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 RFWD2Q8NHY2 731 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 ZNF263O14978 683 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
SGCB-201ENST00000381431 SHBGP04278 402 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 IL10P22301 178 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 YY1P25490 414 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 AQP5P55064 265 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 PKN2Q16513 984 aaKnown RBP17.8■□□□□ 0.44
SGCB-201ENST00000381431 DAB2IPQ5VWQ8 1189 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 METTL7BQ6UX53 244 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 SLC26A11Q86WA9 606 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 MKL1Q969V6 931 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
SGCB-201ENST00000381431 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 UBP1Q9NZI7 540 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
SGCB-201ENST00000381431 SPATA31C1P0DKV0 1188 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 MAPTP10636 758 aaKnown RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 INSRRP14616 1297 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 PDCD2Q16342 344 aaPredicted RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 ATP13A4Q4VNC1 1196 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 WDCPQ9H6R7 721 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 PCDH9Q9HC56 1237 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 AP4E1Q9UPM8 1137 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 AKAP10O43572 662 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 TRAPPC3O43617 180 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 TPST1O60507 370 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 PIAS1O75925 651 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 NAPEPLDQ6IQ20 393 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 IRF2BP2Q7Z5L9 587 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 MAP4K3Q8IVH8 894 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 FAM136AQ96C01 138 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 INPP4AQ96PE3 977 aaPredicted RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 EML4Q9HC35 981 aaKnown RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 CES2O00748 559 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 NDUFS3O75489 264 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 LSM8O95777 96 aaKnown RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 ADRB2P07550 413 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 CYP2C8P10632 490 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 HNRNPH3P31942 346 aaKnown RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 RBBP7Q16576 425 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 A1CFQ9NQ94 594 aaKnown RBP17.79■□□□□ 0.44
SGCB-201ENST00000381431 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
SGCB-201ENST00000381431 SDR42E2A6NKP2 422 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 DNALI1O14645 258 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 DNAJC8O75937 253 aaPredicted RBP17.78■□□□□ 0.44
SGCB-201ENST00000381431 CYP3A4P08684 503 aa17.78■□□□□ 0.44
SGCB-201ENST00000381431 ARHGDIAP52565 204 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms