RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 CDH7Q9ULB5 785 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 SIK3Q9Y2K2 1263 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 MYO10Q9HD67 2058 aa17.15■□□□□ 0.34
SNRPB-201ENST00000381342 RNF225M0QZC1 329 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ZNF197O14709 1029 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 TRIM66O15016 1216 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 MYL4P12829 197 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 CD19P15391 556 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 RFX1P22670 979 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ANXA13P27216 316 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 CCR2P41597 374 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ZNF132P52740 706 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 CYP4A22Q5TCH4 519 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 KLHDC7AQ5VTJ3 777 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 MTSS1LQ765P7 747 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ITFG1Q8TB96 612 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ING5Q8WYH8 240 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 TCEAL4Q96EI5 215 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 HNRNPABQ99729 332 aaKnown RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 GANQ9H2C0 597 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 DNAJC12Q9UKB3 198 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 DUSP12Q9UNI6 340 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 MRPS23Q9Y3D9 190 aaKnown RBP17.14■□□□□ 0.33
SNRPB-201ENST00000381342 ASB3Q9Y575 518 aa17.14■□□□□ 0.33
SNRPB-201ENST00000381342 SLC38A8A6NNN8 435 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 EPHB6O15197 1021 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 TEX33O43247 280 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 SERPINC1P01008 464 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 CEBPBP17676 345 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 USP8P40818 1118 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 EPHA5P54756 1037 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 RAPGEF1Q13905 1077 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 PRSS36Q5K4E3 855 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-201ENST00000381342 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-201ENST00000381342 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 SHC3Q92529 594 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 JAKMIP2Q96AA8 810 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 ASIC4Q96FT7 647 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 C8orf48Q96LL4 319 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-201ENST00000381342 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 KCNK16Q96T55 309 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 SMOQ99835 787 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 PLCB1Q9NQ66 1216 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
SNRPB-201ENST00000381342 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-201ENST00000381342 CNTN6Q9UQ52 1028 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
SNRPB-201ENST00000381342 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-201ENST00000381342 STK25O00506 426 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 BEST1O76090 585 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 NOL4O94818 638 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 PAEPP09466 180 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 CSH1P0DML2 217 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 CSH2P0DML3 217 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 UCHL3P15374 230 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 HMGA1P17096 107 aaKnown RBP17.12■□□□□ 0.33
SNRPB-201ENST00000381342 GJA1P17302 382 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
SNRPB-201ENST00000381342 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 FANCCQ00597 558 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 TAF12Q16514 161 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 ARHGAP17Q68EM7 881 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 CLEC20AQ6ZU45 233 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 SPATA17Q96L03 361 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-201ENST00000381342 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 NAA15Q9BXJ9 866 aaKnown RBP17.12■□□□□ 0.33
SNRPB-201ENST00000381342 GPR88Q9GZN0 384 aa17.12■□□□□ 0.33
SNRPB-201ENST00000381342 TECTAO75443 2155 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 A0A1W2PRU2 124 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 O00370 1275 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 MOSPD3O75425 235 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 VDRP11473 427 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 GABRR2P28476 465 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 AVPR2P30518 371 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 PLA2G5P39877 138 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 USP46P62068 366 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-201ENST00000381342 FILIP1LQ4L180 1135 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 SLC44A3Q8N4M1 653 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 LEMD2Q8NC56 503 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 SHKBP1Q8TBC3 707 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 FGF13Q92913 245 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 IL21Q9HBE4 155 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms