RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 PABPC5Q96DU9 382 aaKnown RBP5.78□□□□□ -1.48
GEN1-202ENST00000381254 DYNLL2Q96FJ2 89 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 EPSTI1Q96J88 318 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 TRIM54Q9BYV2 358 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 SLC38A7Q9NVC3 462 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 ZFP69BQ9UJL9 534 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 CPSF3Q9UKF6 684 aaKnown RBP5.78□□□□□ -1.48
GEN1-202ENST00000381254 GRID1Q9ULK0 1009 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 CASP8AP2Q9UKL3 1982 aa5.78□□□□□ -1.48
GEN1-202ENST00000381254 CLDN3O15551 220 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 LARGE1O95461 756 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 CD4P01730 458 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ICAM1P05362 532 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 KRT4P19013 534 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 IL10P22301 178 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SPRP35270 261 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 SKIV2L2P42285 1042 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 ITGA9Q13797 1035 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 MORF4L2Q15014 288 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 LRRC49Q8IUZ0 686 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TRPC4APQ8TEL6 797 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 RMDN1Q96DB5 314 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 EPAS1Q99814 870 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 MTMR4Q9NYA4 1195 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 PIN4Q9Y237 131 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 SNX5Q9Y5X3 404 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 IGSF9BQ9UPX0 1349 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SOWAHBA6NEL2 793 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 KDM1AO60341 852 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 DEAF1O75398 565 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 NDUFB10O96000 172 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 KRT19P08727 400 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 MCF2P10911 925 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 RFC1P35251 1148 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 GJA5P36382 358 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ETFBP38117 255 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ATP1A2P50993 1020 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 EPHB3P54753 998 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 KLC1Q07866 573 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TROAPQ12815 778 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 STARD3Q14849 445 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 EFHC2Q5JST6 749 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TRIM67Q6ZTA4 783 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 KCTD6Q8NC69 237 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TTC8Q8TAM2 541 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 GPKOWQ92917 476 aaPredicted RBP eCLIP5.77□□□□□ -1.49
GEN1-202ENST00000381254 E2F7Q96AV8 911 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 GAD1Q99259 594 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ASPSCR1Q9BZE9 553 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 FAM117AQ9C073 453 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ZWILCHQ9H900 591 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SAR1AQ9NR31 198 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 PCDHB8Q9UN66 801 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ARIH1Q9Y4X5 557 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 MAP2P11137 1827 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 TRPC5OSA6NMA1 111 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 A8MXQ7 604 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TM9SF1O15321 606 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SNRPAP09012 282 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 CYP11B2P19099 503 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ATICP31939 592 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 CDK7P50613 346 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 GRB10Q13322 594 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 MEA1Q16626 185 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 NFIL3Q16649 462 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ZNF484Q5JVG2 852 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 LBX2Q6XYB7 198 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.77□□□□□ -1.49
GEN1-202ENST00000381254 SFR1Q86XK3 245 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 GMCL1Q96IK5 515 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 C10orf88Q9H8K7 445 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TTC7AQ9ULT0 858 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 TMCO1Q9UM00 188 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 CCT8L1PA6NM43 557 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 HSPA4LO95757 839 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 PRR29P0C7W0 189 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TGFB3P10600 412 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 AKR1B1P15121 316 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 UCHL3P15374 230 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 ALDH5A1P51649 535 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 RBP5P82980 135 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SIGLEC14Q08ET2 396 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SIM2Q14190 667 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 DRAP1Q14919 205 aaPredicted RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 PDK1Q15118 436 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 CCDC137Q6PK04 289 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 ACER1Q8TDN7 264 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 C12orf42Q96LP6 360 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 CCT8L2Q96SF2 557 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 VAT1Q99536 393 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SENP7Q9BQF6 1050 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 FAM192AQ9GZU8 254 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 TPX2Q9ULW0 747 aaKnown RBP5.77□□□□□ -1.49
GEN1-202ENST00000381254 STARD13Q9Y3M8 1113 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 INO80B-WBP1J3KQ70 363 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 MOCS3O95396 460 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 NPTXRO95502 500 aa5.77□□□□□ -1.49
GEN1-202ENST00000381254 SYPP08247 313 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms