RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RETP07949 1114 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 PDGFRBP09619 1106 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 P4HA1P13674 534 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 HDCP19113 662 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 BDNFP23560 247 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 AFMP43652 599 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 IFNAR2P48551 515 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 PSMC1P62191 440 aaKnown RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 NOP14P78316 857 aaKnown RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 WDR72Q3MJ13 1102 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 FOXD4L6Q3SYB3 417 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 FOXD4L3Q6VB84 417 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 SLC9A9Q8IVB4 645 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 OR6B3Q8NGW1 331 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 TTC8Q8TAM2 541 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 CCDC47Q96A33 483 aaKnown RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 RMDN1Q96DB5 314 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 PCED1BQ96HM7 432 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 TTLL2Q9BWV7 592 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 CRTAC1Q9NQ79 661 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
RPAIN-202ENST00000381208 DLL3Q9NYJ7 618 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
RPAIN-202ENST00000381208 K7ESF4 209 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 ATP2C2O75185 946 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
RPAIN-202ENST00000381208 CMA1P23946 247 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 DNM1Q05193 864 aaKnown RBP13.84□□□□□ -0.19
RPAIN-202ENST00000381208 USP4Q13107 963 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 CUL4BQ13620 913 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 SIM2Q14190 667 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-202ENST00000381208 ZNF77Q15935 545 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 Q6ZS52 159 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 FAM84AQ96KN4 292 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 TNIP3Q96KP6 325 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 ECT2Q9H8V3 914 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 GCNT4Q9P109 453 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 ATP6V1DQ9Y5K8 247 aa13.84□□□□□ -0.19
RPAIN-202ENST00000381208 A8MXQ7 604 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 CHURC1-FNTBB4DL54 471 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 PDXKO00764 312 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SLC9A3R1O14745 358 aaPredicted RBP13.83□□□□□ -0.19
RPAIN-202ENST00000381208 NFATC1O95644 943 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.19
RPAIN-202ENST00000381208 FNTBP49356 437 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 CLDN10P78369 228 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 KRT85P78386 507 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 BIRC3Q13489 604 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 TDRD10Q5VZ19 366 aaKnown RBP13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 TRIM68Q6AZZ1 485 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 PRR23BQ6ZRT6 265 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 WDR5BQ86VZ2 330 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 CAMKK1Q8N5S9 505 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SH3RF2Q8TEC5 729 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 CCDC34Q96HJ3 373 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 P2RY13Q9BPV8 354 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SERTAD1Q9UHV2 236 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 SLC8A2Q9UPR5 921 aa13.83□□□□□ -0.19
RPAIN-202ENST00000381208 F8VP50 259 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 HCRTO43612 131 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 RTN3O95197 1032 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 GJA4P35212 333 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 MYL6P60660 151 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 FSTL4Q6MZW2 842 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 CEP68Q76N32 757 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF516Q92618 1163 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 TAF4BQ92750 862 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 ACDQ96AP0 544 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 PAGE5Q96GU1 130 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 DMAC2Q9NW81 257 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
RPAIN-202ENST00000381208 USP18Q9UMW8 372 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.2
RPAIN-202ENST00000381208 DENND4CQ5VZ89 1909 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 ZNF840PA6NDX5 716 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 IKBKBO14920 756 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 MAPK13O15264 365 aa13.82□□□□□ -0.2
RPAIN-202ENST00000381208 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-202ENST00000381208 KLRC4O43908 158 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms