RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CXCL8P10145 99 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 EFHC2Q5JST6 749 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 KIAA0319LQ8IZA0 1049 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 ARFGAP1Q8N6T3 406 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 GPR20Q99678 358 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 AGTPBP1Q9UPW5 1226 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 SHOC2Q9UQ13 582 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 CCDC189A1A4V9 331 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 TOM1L1O75674 476 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 TAF5Q15542 800 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 BBS9Q3SYG4 887 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 DRICH1Q6PGQ1 229 aaPredicted RBP17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 IGDCC3Q8IVU1 814 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 CPB2Q96IY4 423 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 BATF3Q9NR55 127 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
NKX3-1-201ENST00000380871 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 MSCO60682 206 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 RFC5P40937 340 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 TARBP2Q15633 366 aaKnown RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 ERO1BQ86YB8 467 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 EMC1Q8N766 993 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 JOSD2Q8TAC2 188 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 SLC35B2Q8TB61 432 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CISHQ9NSE2 258 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 ARL8BQ9NVJ2 186 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 KAT6AQ92794 2004 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CFAP69A5D8W1 941 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CST8O60676 142 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 VTNP04004 478 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 ITGAVP06756 1048 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 PTDSS1P48651 473 aaKnown RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CCNG1P51959 295 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 ZNF132P52740 706 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 ZNF699Q32M78 642 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CAPRIN2Q6IMN6 1127 aaKnown RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 UNC45BQ8IWX7 931 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 MZB1Q8WU39 189 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 OSBPL1AQ9BXW6 950 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CNTN6Q9UQ52 1028 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 CHMP2BQ9UQN3 213 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
NKX3-1-201ENST00000380871 RPL22P35268 128 aaKnown RBP17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 TUBP50607 506 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 TMEM62Q0P6H9 643 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 BLMHQ13867 455 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 C9orf131Q5VYM1 1079 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 ACO2Q99798 780 aaKnown RBP17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.31
NKX3-1-201ENST00000380871 DOCK1Q14185 1865 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 CNMDO75829 334 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 ZNF286BP0CG31 522 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 GCKP35557 465 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 IER5Q5VY09 327 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM71DQ8N9W8 422 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SENP1Q9P0U3 644 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 PCSK1NQ9UHG2 260 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SLC24A2Q9UI40 661 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 DRG1Q9Y295 367 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 STYXL1Q9Y6J8 313 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 OGTO15294 1046 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 ATP5HO75947 161 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 ERFP50548 548 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 MCL1Q07820 350 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SEPT7Q16181 437 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 BRSK2Q8IWQ3 736 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 DCAKDQ8WVC6 231 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 CADM1Q9BY67 442 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SYNCQ9H7C4 482 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 HEY2Q9UBP5 337 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 CYTH4Q9UIA0 394 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 KCNG1Q9UIX4 513 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SOCS7O14512 581 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 C2CD2LO14523 706 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 TBXAS1P24557 533 aaPredicted RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 SLC18A1P54219 525 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 PPP1R15BQ5SWA1 713 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 NAT8LQ8N9F0 302 aa17.01■□□□□ 0.31
NKX3-1-201ENST00000380871 IGKV6D-21A0A0A0MT36 114 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 MAP3K13O43283 966 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 PSMA2P25787 234 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 BASP1P80723 227 aaKnown RBP17■□□□□ 0.31
NKX3-1-201ENST00000380871 SLC45A4Q5BKX6 768 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 FYB2Q5VWT5 728 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms