RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MTMR3Q13615 1198 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 PIGHQ14442 188 aaPredicted RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 FAM133BQ5BKY9 247 aaKnown RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 MFSD7Q6UXD7 560 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 APBB1IPQ7Z5R6 666 aaPredicted RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 SOCS4Q8WXH5 440 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 PRCCQ92733 491 aaPredicted RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 MRPL45Q9BRJ2 306 aaKnown RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 FAM167BQ9BTA0 163 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 TXLNGYQ9BZA5 131 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 BRCA2P51587 3418 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 C17orf102A2RUQ5 167 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 SIGLEC16A6NMB1 481 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 C6orf222P0C671 652 aaPredicted RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 GPD2P43304 727 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 MAGOHP61326 146 aaKnown RBP14.98□□□□□ -0.01
CLCN4-201ENST00000380829 ARMC3Q5W041 872 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 SLITRK1Q96PX8 696 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 ASIC3Q9UHC3 531 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 CEP350Q5VT06 3117 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 STAU1O95793 577 aaKnown RBP14.97□□□□□ -0.01
CLCN4-201ENST00000380829 VPS41P49754 854 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 PURAQ00577 322 aaKnown RBP14.97□□□□□ -0.01
CLCN4-201ENST00000380829 CNGA2Q16280 664 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 SMTNL2Q2TAL5 461 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 LRIG3Q6UXM1 1119 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 C7orf31Q8N865 590 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 NT5C1AQ9BXI3 368 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 ARHGAP39Q9C0H5 1083 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 CPSF2Q9P2I0 782 aaKnown RBP14.97□□□□□ -0.01
CLCN4-201ENST00000380829 TSPAN16Q9UKR8 245 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 CCT8L1PA6NM43 557 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 A8MUI8 341 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 HMGCRP04035 888 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 GHRP10912 638 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 ZBTB6Q15916 424 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 UBAP2Q5T6F2 1119 aaKnown RBP14.97□□□□□ -0.01
CLCN4-201ENST00000380829 ACOT1Q86TX2 421 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 SESTD1Q86VW0 696 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 RCOR2Q8IZ40 523 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 ARFGAP1Q8N6T3 406 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 NIPA2Q8N8Q9 360 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 BEST2Q8NFU1 509 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 RBM41Q96IZ5 413 aaKnown RBP14.97□□□□□ -0.01
CLCN4-201ENST00000380829 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 ZWILCHQ9H900 591 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 PARP2Q9UGN5 583 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 DERAQ9Y315 318 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 NME7Q9Y5B8 376 aa14.97□□□□□ -0.01
CLCN4-201ENST00000380829 LRRD1A4D1F6 860 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 FAM155AB1AL88 458 aaPredicted RBP14.96□□□□□ -0.01
CLCN4-201ENST00000380829 HCRTO43612 131 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 IGHA2P01877 340 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 AKR1A1P14550 325 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 PMS2P54278 862 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 KCNJ2P63252 427 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 RBBP5Q15291 538 aaKnown RBP14.96□□□□□ -0.01
CLCN4-201ENST00000380829 KCNT1Q5JUK3 1230 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 PRUNE1Q86TP1 453 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 ART4Q93070 314 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 IRAK4Q9NWZ3 460 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 CNTN3Q9P232 1028 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 MTRF1LQ9UGC7 380 aaKnown RBP14.96□□□□□ -0.01
CLCN4-201ENST00000380829 GGT7Q9UJ14 662 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 SLC12A4Q9UP95 1085 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 Q9Y3F1 56 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 LRCH4O75427 683 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 LINGO3P0C6S8 592 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 RAB27AP51159 221 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 CALCOCO2Q13137 446 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 PCBP1Q15365 356 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLCN4-201ENST00000380829 GOLGA7BQ2TAP0 167 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 PPP1R26Q5T8A7 1209 aaPredicted RBP14.96□□□□□ -0.01
CLCN4-201ENST00000380829 LRRC38Q5VT99 294 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 SPOCD1Q6ZMY3 1216 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 ATL2Q8NHH9 583 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 HAUS1Q96CS2 278 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 LPIN3Q9BQK8 851 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 EPB41L4BQ9H329 900 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 GOLGA2P5Q9HBQ8 144 aa14.96□□□□□ -0.01
CLCN4-201ENST00000380829 E5RJQ4 531 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 TP73O15350 636 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 CAND2O75155 1236 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 GAS8O95995 478 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 PECAM1P16284 738 aaPredicted RBP14.95□□□□□ -0.02
CLCN4-201ENST00000380829 IL1R2P27930 398 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 GBP1P32455 592 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 CETN2P41208 172 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 RGS7P49802 495 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 ZNF268Q14587 947 aaPredicted RBP14.95□□□□□ -0.02
CLCN4-201ENST00000380829 CCNG2Q16589 344 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
CLCN4-201ENST00000380829 FAM102AQ5T9C2 384 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms