RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 C2CD2Q9Y426 696 aa18.63■□□□□ 0.57
HMGN1-203ENST00000380748 K7ENM7 598 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 LEFTY2O00292 366 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 SCAMP3O14828 347 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 AP5Z1O43299 807 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 SH3BP5O60239 455 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 FTH1P19P0C7X4 201 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 KIR2DL1P43626 348 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 RPL6Q02878 288 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 BYSLQ13895 437 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 HNRNPDQ14103 355 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 TRIP6Q15654 476 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 SV2CQ496J9 727 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 ARSHQ5FYA8 562 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 CCNI2Q6ZMN8 369 aaPredicted RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 FILIP1Q7Z7B0 1213 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 ADAMTS14Q8WXS8 1223 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 LRIG1Q96JA1 1093 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 ASB7Q9H672 318 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
HMGN1-203ENST00000380748 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
HMGN1-203ENST00000380748 ASXL3Q9C0F0 2248 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 MYO18AQ92614 2054 aaKnown RBP18.61■□□□□ 0.57
HMGN1-203ENST00000380748 MYMKA6NI61 221 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 TISP43B9A030 160 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 ARHGAP33O14559 1287 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 KAT7O95251 611 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 PLA2G4BP0C869 781 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 KDSRQ06136 332 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 HSF5Q4G112 596 aaPredicted RBP18.61■□□□□ 0.57
HMGN1-203ENST00000380748 INTS6LQ5JSJ4 861 aaKnown RBP18.61■□□□□ 0.57
HMGN1-203ENST00000380748 HYIQ5T013 277 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 SCN4BQ8IWT1 228 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 FSIP1Q8NA03 581 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 PNKPQ96T60 521 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
HMGN1-203ENST00000380748 KCND2Q9NZV8 630 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 KALRNO60229 2985 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
HMGN1-203ENST00000380748 ANKRD63C9JTQ0 380 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 HCRTO43612 131 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 APODP05090 189 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 ANAPC15P60006 121 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 ATP2C1P98194 919 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-203ENST00000380748 ZNF33AQ06730 810 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 DHCR24Q15392 516 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 DTHD1Q6ZMT9 781 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 FBXO18Q8NFZ0 1043 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 ZNF560Q96MR9 790 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 REEP2Q9BRK0 252 aa18.6■□□□□ 0.57
HMGN1-203ENST00000380748 EIF4E1BA6NMX2 242 aaKnown RBP18.59■□□□□ 0.57
HMGN1-203ENST00000380748 PRPHP41219 470 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 RESTQ13127 1097 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 RABEPKQ7Z6M1 372 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 SPATA2LQ8IUW3 424 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-203ENST00000380748 ADGRG2Q8IZP9 1017 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 PCDHB9Q9Y5E1 797 aa18.59■□□□□ 0.57
HMGN1-203ENST00000380748 MAST4O15021 2626 aa18.58■□□□□ 0.57
HMGN1-203ENST00000380748 LAD1O00515 517 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 GJB3O75712 270 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 GABRG2P18507 467 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 EIF2DP41214 584 aaKnown RBP18.58■□□□□ 0.56
HMGN1-203ENST00000380748 CFAP221Q4G0U5 840 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 SCARA3Q6AZY7 606 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 SLC36A4Q6YBV0 504 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 SLC41A1Q8IVJ1 513 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 NAXDQ8IW45 347 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 MYCT1Q8N699 235 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 ADAM32Q8TC27 787 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 SMPD4Q9NXE4 827 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 ODF2LQ9ULJ1 636 aa18.58■□□□□ 0.56
HMGN1-203ENST00000380748 URB1O60287 2271 aaKnown RBP18.58■□□□□ 0.56
HMGN1-203ENST00000380748 PTPRBP23467 1997 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 SYPP08247 313 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
HMGN1-203ENST00000380748 GRIA2P42262 883 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 PDE6CP51160 858 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 WNT7BP56706 349 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 USP46P62068 366 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 MYL7Q01449 175 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 SLC14A1Q13336 389 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 TMEM119Q4V9L6 283 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 RHBDF2Q6PJF5 856 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 CRELD2Q6UXH1 353 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-203ENST00000380748 CCDC83Q8IWF9 413 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 PHTF2Q8N3S3 785 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 HSPA12BQ96MM6 686 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 RNF38Q9H0F5 515 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms