RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 MAGEA4P43358 317 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 NRLP54845 237 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 OTUD4Q01804 1114 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ADCY1Q08828 1119 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ACVR2BQ13705 512 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GRB14Q14449 540 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 LRRC14Q15048 493 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM102AQ5T9C2 384 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ZCCHC9Q8N567 271 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 OR6J1Q8NGC5 347 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ACTL9Q8TC94 416 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 HSPH1Q92598 858 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MCRS1Q96EZ8 462 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 SEC16BQ96JE7 1060 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 SERPINB12Q96P63 405 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 TINF2Q9BSI4 451 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 EIF2AQ9BY44 585 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 CYP3A43Q9HB55 503 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MLXIPLQ9NP71 852 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 TSPAN16Q9UKR8 245 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 BARX2Q9UMQ3 279 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 DRG1Q9Y295 367 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 E5RJQ4 531 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GOLGA8MH3BSY2 632 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 HCRTO43612 131 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ITGAVP06756 1048 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 VDRP11473 427 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 RGS7P49802 495 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GTF2A2P52657 109 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 LMNB2Q03252 620 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 INCA1Q0VD86 236 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MPP2Q14168 576 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 SPRED3Q2MJR0 410 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 C15orf59Q2T9L4 293 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GLRA4Q5JXX5 417 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 CPLX4Q7Z7G2 160 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 CROCCP2Q86T23 111 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MGARPQ8TDB4 240 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 FNIP1Q8TF40 1166 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 GTF3C2Q8WUA4 911 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 NKD2Q969F2 451 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 CHMP6Q96FZ7 201 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 MRPL45Q9BRJ2 306 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 TSPYL1Q9H0U9 437 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 SAYSD1Q9NPB0 183 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 KLHL42Q9P2K6 505 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 ITGA11Q9UKX5 1188 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 C2CD2Q9Y426 696 aa8.36□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 HMGCRP04035 888 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GSCP56915 257 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RBP5P82980 135 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 MTM1Q13496 603 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 DGKDQ16760 1214 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CAPN12Q6ZSI9 719 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM183BPQ6ZVS7 135 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CYP4V2Q6ZWL3 525 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TADA2BQ86TJ2 420 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RELL1Q8IUW5 271 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 LRRC34Q8IZ02 419 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 BBOF1Q8ND07 529 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 C18orf25Q96B23 403 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 FAXDC2Q96IV6 333 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 ADPGKQ9BRR6 497 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TUBGCP4Q9UGJ1 667 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TPX2Q9ULW0 747 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 USP18Q9UMW8 372 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 NAALADL1Q9UQQ1 740 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 RALGAPA2Q2PPJ7 1873 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 A0A087WUV0 522 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GPR32O75388 356 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 KRT7P08729 469 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GCAP28676 217 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GRM5P41594 1212 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 GCLCP48506 637 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TAZQ16635 292 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 HADHQ16836 314 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CDO1Q16878 200 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CCDC142Q17RM4 750 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 PPP1R26Q5T8A7 1209 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 ANKRD22Q5VYY1 191 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 ANKRD23Q86SG2 305 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 ACOT1Q86TX2 421 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 KCTD6Q8NC69 237 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 OSMRQ99650 979 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM106CQ9BVX2 250 aa8.35□□□□□ -1.07
PDLIM5-204ENST00000380176 CALN1Q9BXU9 219 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms