RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ITGA11Q9UKX5 1188 aa8.17□□□□□ -1.1
CDKL5-202ENST00000379996 PCDHB2Q9Y5E7 798 aa8.17□□□□□ -1.1
CDKL5-202ENST00000379996 TRIM43BA6NCK2 446 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 MGEA5O60502 916 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 PYGMP11217 842 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ATF7P17544 494 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 EN2P19622 333 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 LRPAP1P30533 357 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ATICP31939 592 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ZBTB41Q5SVQ8 909 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 RTN4RL1Q86UN2 441 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 SLC47A2Q86VL8 602 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ATCAYQ86WG3 371 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ECHDC2Q86YB7 292 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 RPUSD2Q8IZ73 545 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CCDC26Q8TAB7 109 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TRIM43Q96BQ3 446 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 RUFY1Q96T51 708 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FMO2Q99518 471 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 HTATIP2Q9BUP3 242 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FAM129AQ9BZQ8 928 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 RABEP2Q9H5N1 569 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 LRRC19Q9H756 370 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TMEM161AQ9NX61 479 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ABHD14A-ACY1A0A1B0GW23 586 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 NDUFAB1O14561 156 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FTLP02792 175 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 GHRP10912 638 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 COMTP21964 271 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CHRNA3P32297 505 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TNFSF9P41273 254 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 YARSP54577 528 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 EIF3BP55884 814 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 LIMS2Q7Z4I7 341 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 PIGWQ7Z7B1 504 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TMEM199Q8N511 208 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 SPATA18Q8TC71 538 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FBXO25Q8TCJ0 367 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CTNNBL1Q8WYA6 563 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CCT6BQ92526 530 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 PPP1R10Q96QC0 940 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 RAB17Q9H0T7 212 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 GMNCA6NCL1 334 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CTSHP09668 335 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 TCF3P15923 654 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FGFR4P22455 802 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 GPC5P78333 572 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 CETN1Q12798 172 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 KLF1Q13351 362 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 SP7Q8TDD2 431 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ABHD8Q96I13 439 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 UROC1Q96N76 676 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 ACP6Q9NPH0 428 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 SLC38A7Q9NVC3 462 aa8.16□□□□□ -1.1
CDKL5-202ENST00000379996 UTP11Q9Y3A2 253 aaKnown RBP8.16□□□□□ -1.1
CDKL5-202ENST00000379996 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 ENPP3O14638 875 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 FSCN2O14926 492 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 MMEP08473 750 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 ABCB4P21439 1286 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 HNRNPH1P31943 449 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 SOX11P35716 441 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 ACOT2P49753 483 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 WNT7BP56706 349 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 PDE4CQ08493 712 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 ENOSF1Q7L5Y1 443 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 NPAS4Q8IUM7 802 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 LRRC52Q8N7C0 313 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 UBE2TQ9NPD8 197 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 IL23AQ9NPF7 189 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 ATP11BQ9Y2G3 1177 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 PTPRJQ12913 1337 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 LACTBL1A8MY62 500 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 TMCO5BA8MYB1 307 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 TMEM189-UBE2V1I3L0A0 370 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 RIPK2O43353 540 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 RARAP10276 462 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 CYP11B1P15538 503 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 LIG3P49916 1009 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 MXI1P50539 228 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 PMS2P54278 862 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 MAGOHP61326 146 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 CDR2Q01850 454 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 TDRD10Q5VZ19 366 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 MMS22LQ6ZRQ5 1243 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 SLC13A5Q86YT5 568 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 UBR7Q8N806 425 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 GSTCDQ8NEC7 633 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 MAGOHBQ96A72 148 aaKnown RBP8.15□□□□□ -1.1
CDKL5-202ENST00000379996 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 TCHPQ9BT92 498 aa8.15□□□□□ -1.1
CDKL5-202ENST00000379996 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms