RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 NAPEPLDQ6IQ20 393 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 EPHX4Q8IUS5 362 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 BLOC1S5Q8TDH9 187 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 TEX13BQ9BXU2 312 aa11.63□□□□□ -0.55
PTCHD1-201ENST00000379361 UMPSP11172 480 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 FCGR1AP12314 374 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PURAQ00577 322 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 NCAPHQ15003 741 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 TRIM16LQ309B1 348 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 RFFLQ8WZ73 363 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ITGA1P56199 1179 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 SPP2Q13103 211 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 SEMA3FQ13275 785 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 EIF2AK1Q9BQI3 630 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MFN2O95140 757 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PCDH8O95206 1070 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CTSHP09668 335 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 DSG3P32926 999 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 BTKQ06187 659 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MTMR2Q13614 643 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 TKFCQ3LXA3 575 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PARP9Q8IXQ6 854 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 NDOR1Q9UHB4 597 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PNMA8BQ9ULN7 279 aaPredicted RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 RHOBTB3O94955 611 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CLUP10909 449 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 RFC5P40937 340 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PTGER2P43116 358 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 NCKAP1Q9Y2A7 1128 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF839A8K0R7 811 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 SLC16A3O15427 465 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MYBL2P10244 700 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 OXCT1P55809 520 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CCNG2Q16589 344 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 BTN2A1Q7KYR7 527 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 TFB1MQ8WVM0 346 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 VAV3Q9UKW4 847 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 AAR2Q9Y312 384 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PCDHGB3Q9Y5G1 929 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 RENBPP51606 427 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ATP2C1P98194 919 aaPredicted RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 DPCR1Q3MIW9 517 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MRNIPQ6NTE8 343 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 GATAD2AQ86YP4 633 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 SNX6Q9UNH7 406 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CRTAMO95727 393 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CLK3P49761 638 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 C3orf20Q8ND61 904 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ARHGEF26Q96DR7 871 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ADGRE3Q9BY15 652 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 SNX9Q9Y5X1 595 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ITGA9Q13797 1035 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 TTC39BQ5VTQ0 682 aaPredicted RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 THUMPD3Q9BV44 507 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 RAB6BQ9NRW1 208 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 STX7O15400 261 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CACTIN-AS1Q8N1I8 211 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 VTA1Q9NP79 307 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ZSWIM5Q9P217 1185 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF112Q9UJU3 913 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 POTECB2RU33 542 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PDGFRBP09619 1106 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 PTPN1P18031 435 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MAGEC3Q8TD91 643 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 CHST12Q9NRB3 414 aa11.62□□□□□ -0.55
PTCHD1-201ENST00000379361 MFAP3LO75121 409 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 RCAN1P53805 252 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ELL3Q9HB65 397 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 SEC31AO94979 1220 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 MYL12AP19105 171 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ITGALP20701 1170 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 CBFBQ13951 182 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM83EQ2M2I3 478 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 GEMP55040 296 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 KLHL12Q53G59 568 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 STX12Q86Y82 276 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 BHMTQ93088 406 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ITIH6Q6UXX5 1313 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 XYLBO75191 536 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 HOXC12P31275 282 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 OR1G1P47890 313 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 ALDH9A1P49189 494 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
PTCHD1-201ENST00000379361 FRMD5Q7Z6J6 570 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms