RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 COBLL1Q53SF7 1204 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ING2Q9H160 280 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 FBXO9Q9UK97 447 aaPredicted RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 IFT172Q9UG01 1749 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 MYO5BQ9ULV0 1848 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 A0A087WXM4 84 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 VILLO15195 856 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SLC16A3O15427 465 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 MGEA5O60502 916 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ABHD2P08910 425 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SERPINB5P36952 375 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 GRIA2P42262 883 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 EFTUD2Q15029 972 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 TLR1Q15399 786 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SMAD1Q15797 465 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PLEKHG4Q58EX7 1191 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ZC3H15Q8WU90 426 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 TGFBRAP1Q8WUH2 860 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SRPK1Q96SB4 655 aaKnown RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 C6orf203Q9P0P8 240 aaPredicted RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ADAMTS6Q9UKP5 1117 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ARHGEF35A5YM69 484 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 ITM2AO43736 263 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A9O60656 530 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 SGPL1O95470 568 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 CHRNB2P17787 502 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A6P19224 532 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A1P22309 533 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A4P22310 534 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A3P35503 534 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A5P35504 534 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
USP6NL-202ENST00000379237 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 LRRC15Q8TF66 581 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A7Q9HAW7 530 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A10Q9HAW8 530 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 UGT1A8Q9HAW9 530 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 GTF3C4Q9UKN8 822 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 PSMD13Q9UNM6 376 aa11.38□□□□□ -0.59
USP6NL-202ENST00000379237 MYH1P12882 1939 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CYTH3O43739 400 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 MFN2O95140 757 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CSPG5O95196 566 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 RPA1P27694 616 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 PCSK6P29122 969 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 RAB15P59190 212 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 EPC2Q52LR7 807 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 C16orf89Q6UX73 402 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 ZSCAN18Q8TBC5 510 aaPredicted RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 APOPT1Q96IL0 206 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 FAM96AQ9H5X1 160 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 RAB26Q9ULW5 256 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 H0YIN7 160 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 DCXO43602 365 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 TFAP2AP05549 437 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 SLC5A2P31639 672 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 GTF2H1P32780 548 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 PKNOX1P55347 436 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 TPTEP56180 551 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 SPIDRQ14159 915 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 ZFYVE19Q96K21 471 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 EHD1Q9H4M9 534 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 AURKCQ9UQB9 309 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 ETS1P14921 441 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CCNG2Q16589 344 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 PDPK2PQ6A1A2 396 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 ZNF410Q86VK4 478 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 SLFN12Q8IYM2 578 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 FBXO27Q8NI29 283 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 CDRT15Q96T59 188 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 ANO3Q9BYT9 981 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 PARVGQ9HBI0 331 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 MRPL47Q9HD33 250 aaKnown RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 VPS51Q9UID3 782 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 FAM32AQ9Y421 112 aaKnown RBP11.37□□□□□ -0.59
USP6NL-202ENST00000379237 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
USP6NL-202ENST00000379237 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 H7C0C1 242 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 TCEA3O75764 348 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 LDHCP07864 332 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 SNRPAP09012 282 aaKnown RBP11.36□□□□□ -0.59
USP6NL-202ENST00000379237 HSPA8P11142 646 aaKnown RBP11.36□□□□□ -0.59
USP6NL-202ENST00000379237 CYP2C9P11712 490 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 KCNA2P16389 499 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 ATP5OP48047 213 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 FAAP100Q0VG06 881 aa11.36□□□□□ -0.59
USP6NL-202ENST00000379237 PEX6Q13608 980 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms